Wallemia mellicola: WALSEDRAFT_60313
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Entry
WALSEDRAFT_60313 CDS
T03142
Name
(RefSeq) Suf-domain-containing protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
wse
Wallemia mellicola
Pathway
wse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
WALSEDRAFT_60313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_60313
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
WALSEDRAFT_60313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
TPR_19
Iml2-TPR_39
Sgf11_N
ATG14
Motif
Other DBs
NCBI-GeneID:
18473881
NCBI-ProteinID:
XP_006958254
JGI:
Walse1_60313
UniProt:
I4YC62
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MEENVYNSDTQQAISEQLESLTQGLANDDAAQEEQQEEHYQPPFLRDEHSEDPNETYKDA
QQTLEDVAQSDDQQVVAAPNLPNISITPTPTPPIPAAVNTDVKSSQLPPLPVPKDRKESL
EMQIQKDERDVDSWLDLISYLDSQGRNLVGDELESWWTEYTRVYDNFFKIWPCAVKQWQN
YIDKCLSLTPPRMKKVEEIFSKALKQTPSPEFWSSYLNYIRRNNQGAEGRQIVIKAYEFA
ISHVGQDKDSGEIWLGYIRFLKDGSATNTWEEQQRMDALRRTYQRAVVIPIQNLEAIWRE
WDSFEGSLNKVTAKKFLADKSPAYMTARSALREIRSLTDPPISLFHIDGTLAKVPSWTER
ERQVISAWKRYLAWEEGNPLELDDNSAKHSRVSYAYKKALVYMRFYPEFWYRAYMSHKSM
GKDEEAISLLKQGSEANPESYLLSFALAEVEEINHRYKEAHDILNNLLTSIINQTKEIEN
GILRQQAELNNQLPSIEQQANASQAAGENEGEVREKRRLAEDEINTKKEAISKAKAKDIE
DLCKGAGLVWVMKMRLGRRTEGIKAARAVFKEARSSPYCTWQVFEAGAMMEYHSSKDSSV
ATKIFELGLKRFTTEIDYVIKYLDFLININDEGNARALFERIAPSLPADKARPLWTRWAS
YEYFYSDLPSALKLEQRLADTFPDEQPLRRFAERHTHQRIDKIATNDLGYGVKPPTAPMK
IVEATAASAATKRPPVDLEEERNKRMRKDPPSGRNSRQTSQQGLPQPPHRNTPVPNVQIG
GAPIHLGGGRPAPVAMMPPRPAAKDPVGIFLQQLPQARYFDGPMINTEDILFAFRHINLP
PV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatgtttacaattctgatactcagcaagctatatctgagcagctagaatca
ctcacacaggggttggcaaatgatgacgcagctcaagaagagcaacaagaagagcattat
cagccacctttcctccgtgatgaacattctgaggatcctaatgaaacttacaaagacgct
caacaaactctagaagacgtcgctcagagtgacgatcaacaagttgtagcagcacctaat
ttacctaacatttctattacgcctacgcctacaccaccaataccggctgctgtcaacact
gacgtgaaatcatcccaattacctcctttgcccgtaccaaaggatagaaaagagagcctt
gaaatgcagattcaaaaggatgagcgtgacgttgattcttggctagatttgattagttat
ttggatagccaaggtcgtaacctcgtaggtgacgagttggaatcttggtggacagagtat
accagagtatacgataacttctttaagatttggccctgtgctgtgaaacaatggcagaat
tatatcgataaatgcctcagtttgactccaccgagaatgaaaaaagtggaagagatattc
agtaaagcgttgaaacagacgccttcacctgaattttggtcgagttatttgaactacatc
cgtcgtaacaaccaaggcgcagaaggtagacagattgttatcaaagcatacgagtttgcc
atctcacacgttggacaagataaagattctggcgagatttggctcggctacattagattt
ttgaaggatggttcagcgacgaacacatgggaggaacaacagcgaatggatgcactcaga
agaacttatcagagggccgtcgtcatcccaattcagaatttggaagccatttggagagaa
tgggattcatttgaaggttcattgaataaggttacagcaaaaaaattcttagcagataag
tcacctgcttacatgactgcaagatcagctctcagagaaatcagaagcttgactgatcca
ccgatcagtctgttccatatcgatggcaccctcgcaaaggttcctagctggacagagagg
gaacgtcaagtgataagtgcctggaagcgttacctcgcatgggaagaaggtaatccattg
gagcttgacgataatagtgcaaaacatagtagagtatcatatgcatacaagaaagcattg
gtatatatgcgtttctacccagaattctggtaccgtgcatacatgtcacacaagtcaatg
ggtaaagacgaagaggctataagtctcctcaaacaaggcagtgaagccaatcctgagagc
tatcttctatcattcgctttagctgaagttgaagaaattaaccaccgttacaaagaagca
catgatatattgaacaatttactcacgtccatcatcaaccaaaccaaagagattgaaaat
ggtattttacgccaacaagcagaattgaacaatcaattgccaagtatagagcaacaggct
aatgcttcacaagcagctggcgaaaatgaaggcgaagtcagagagaagagacgtctcgct
gaagatgagatcaataccaagaaggaagcgatcagcaaagcgaaagcaaaagatattgaa
gacctttgtaaaggtgctggattagtttgggtgatgaaaatgagattgggtagaagaacc
gaaggtatcaaggccgcgagagctgtattcaaggaagctcgttcatcgccatactgtact
tggcaagtattcgaagctggagctatgatggaataccacagctcaaaagactcctctgtt
gcaacaaagatattcgagcttggattgaagcgcttcacgacagagattgactacgttatt
aagtatttggatttcttgattaacattaacgacgaaggaaacgcacgcgcattgtttgag
aggatagcaccaagtcttccagccgataaagccagaccactctggacacgctgggcatcc
tacgaatacttctactcagatctaccaagtgcattaaaactcgagcaaagattagcagac
actttcccagacgaacaaccactgaggaggttcgcagagagacacactcaccagcgtatt
gataagatcgcgacgaatgaccttggctatggtgtcaagccacctacagcgcctatgaag
attgtagaagctactgctgcgtctgcagcaactaaacggccaccagttgaccttgaagaa
gagcgtaacaagcgtatgaggaaggatccaccatctggtagaaattcaaggcagacgtca
caacagggtcttccacagcctccacatcgcaacacacctgtaccgaatgtacagattgga
ggtgcaccaatacatcttggaggaggtagacctgcaccagttgcaatgatgccacctaga
ccggctgctaaagaccccgtcggtattttcttacaacagttgcctcaagctaggtacttt
gatggaccgatgataaatacagaagatattttgttcgcctttaggcacataaatttacca
ccagtttaa
DBGET
integrated database retrieval system
