Wallemia mellicola: WALSEDRAFT_60373
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Entry
WALSEDRAFT_60373 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
wse
Wallemia mellicola
Pathway
wse03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
WALSEDRAFT_60373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_60373
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
WALSEDRAFT_60373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
RIX1
Motif
Other DBs
NCBI-GeneID:
18473918
NCBI-ProteinID:
XP_006958369
JGI:
Walse1_60373
UniProt:
I4YCJ0
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MQARPASKLTIRKPDSGVSNTTYATLCKLVLRKRMSRVLVLSLVSKIAIFALSTSNVRDG
FSIILSPFGLQRILFALLAFILADIPVIITRKLALLSSFFYVNNAYSLTKQSAKSQPAPV
GPSKHLKALLLDQKTYNLAVTYAFSAIAYGAVYISCLSAYEDEAGFTPFTSHIRRGWQFN
ERFIFLFLNAALLGAVYALRQLWNDRFVTRFPSNLSSSISSRAQSHLKRNVPMAMKFALI
VVLTVLSSYLLTKKSIYRTVASLSLATFRPHLFTLLRQNNVTFGLVLRTTVFALGLVSSW
EVTNTLFDIYSVHPIIISKIAPNPTDCLISGMQSTDFYYKYFAYLEFVKVFSSSQERRQE
VYKDIHRKPSSWDKILSVAVQELVEGRTKVLTKGVPTNKTPTVVNSTPDATTSSSKLRVV
DNQEIFKRNPKSTVDNFIADVQVDKKASMFSKQTENVPADQGIGFDKILSPEIVKTLKNS
IYGNEESNVNAKIRLLAPDIKLVSLCSLGLAYLGAASIQEDEFGLIQHNIPQVIHEVTST
LLTYEELQIDLEKLTKNSNHLKEYSTRVQEIQNALSILLFAFKDYVKSFNLDEKTQKRVE
LAIKEMK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaggccagcttcgaaattgacgatacggaaaccagatagtggtgtatctaat
acgacatatgccacactctgcaagctcgttttgcggaagcgtatgagccgtgtattagtg
ctctcattggtatctaagatagctatttttgcattatctacttcaaacgttagagacggc
ttcagcattattttatcaccatttggattacagagaatattatttgctctattagctttc
atactagcagatattccggtcattataacccgtaaattggcccttctaagttcgttcttc
tatgtcaacaacgcgtattcactcacaaaacaatcagcaaagtctcaacctgctccagtt
ggcccttctaaacaccttaaagcactcctcctcgatcagaagacatacaatcttgcagta
acctatgcattctctgcaattgcatatggcgctgtctatatctcttgcctgagtgcatac
gaggacgaagctgggttcacacccttcacatcccacatacgtcgtggatggcaattcaat
gagcgttttatattcctcttcttaaatgcagctttactaggcgctgtatacgctctccgt
caactttggaatgatcgctttgtcactagattcccatctaatctttcatcgtctatttca
tcaagagcacaatcgcatctcaaaaggaatgttcctatggctatgaaattcgccctcatt
gttgttctcaccgtgctttcgagctatctcctcaccaagaaatcaatttataggacagta
gcaagcctttctttggctacatttagaccacacttattcacacttttacgtcaaaataat
gtcaccttcggattagtcttacgcactacagtattcgcattaggtttagtgtcgtcttgg
gaagttacaaacacattgttcgatatctacagtgttcatccaattattatctcaaagata
gccccaaatccaacagattgtctcataagtggaatgcaatctaccgacttctactacaaa
tattttgcgtatttagaattcgtgaaggtgttctcgagtagtcaagaacgccgtcaagaa
gtatacaaggatatacacaggaagccatcatcatgggataaaatcctttctgttgctgta
caagagctcgttgaaggacgtacgaaggtgttaacgaagggtgttccaaccaataaaacc
ccaacagttgttaatagtacacctgacgctactacaagcagcagtaaattgcgagttgta
gataatcaagaaatattcaaacgtaatcctaaatcaacggtagacaacttcatagcggat
gtacaagtcgacaagaaagcatctatgttttcaaagcaaactgaaaacgttccagctgat
caaggtattggatttgataaaatactatcaccggagatagtcaaaacactcaaaaattcg
atctatggtaatgaggaatctaacgttaatgctaaaattagattattagcaccagatatt
aaattagtttcactttgttcactcggtttggcttatctcggtgctgcatctatacaagag
gatgaatttggtcttattcaacacaatataccgcaagtaattcatgaggttacatcaact
ttattaacatacgaagaattacaaattgatttagaaaaattaaccaaaaattcaaaccat
ttgaaggaatattcaacacgcgttcaagaaatccaaaatgcgttatctattttattgttt
gcattcaaagattacgtgaaatcgttcaacttggatgaaaaaactcaaaagcgtgttgaa
cttgcaataaaagaaatgaaatga
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