Wallemia mellicola: WALSEDRAFT_60691
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Entry
WALSEDRAFT_60691 CDS
T03142
Name
(RefSeq) RNA processing-related protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
wse
Wallemia mellicola
Pathway
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_60691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_60691
Spliceosome [BR:
wse03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
WALSEDRAFT_60691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
PRP4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR19_1st
NBCH_WD40
Nbas_N
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
RMC1_N
Motif
Other DBs
NCBI-GeneID:
18474102
NCBI-ProteinID:
XP_006959032
JGI:
Walse1_60691
UniProt:
I4YAQ4
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MDTEMKDFDDLVNDDKYEMGTGQELARAELQATEDMFERRRVLRTLAVPTDDNKVRERLR
AFGLPMTLFGERPEDRRSRLKSMIADMQEEAGEKAKIESEDESEEEEEFYTVGSQELLQT
RRLLAEYSIPRAKRRIEKERDDWAKPLKSIVDARKRTFEYIKSFNVLGSQVGDSRPISQV
KFSPDSQLLATGSWTGNIKLWDIPNCNHQMTLRGHDGLVGGVDWHPQATLNQSKSTVNLA
SGSQDSTVALWSLEKDTPLATLKGHTHQVRRVAFHPSGRYLGSASFDETWRLWDVETQAE
LQLQEGHSKEVYALAFQDDGALVGSAGMDAIGRVWDLRTGRTAMVLDGHADKILALDFSP
NGYQCATGSGDGKIMIWDLRALKSISTMPAHNISVGDLKFYRQPERVLNSRNDKQDVKMD
ESGDNEDMSPLVKEPYSHGLFLASAGFDGYTKLWSADDWICQRSIAENSKIMSVDVSRNG
KHLATGEWSRSFKLFGTEL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaaatgaaggattttgacgatcttgtcaatgatgacaagtacgaaatggga
actggacaggaactagctagggctgagctgcaagctacagaggatatgtttgaaaggagg
agagtcctcagaaccctcgctgtacccacagacgacaacaaagttagagagagactcaga
gcattcggtttaccaatgaccctattcggtgaaaggccagaagataggaggagtcgtttg
aaatctatgatcgctgatatgcaggaagaagctggagagaaagccaaaatagaaagcgag
gacgaatctgaagaagaagaggaattctatactgttggttcacaagaattgctgcaaaca
cgaaggttgctagcagaatactccatcccacgagcaaaaaggagaatagagaaagagcgt
gacgattgggcaaaacctctaaagtcaattgtagacgcgaggaaacgtacatttgaatac
atcaagtctttcaatgtactcggatcacaagttggagatagtcgtcctatctcacaagtc
aaattctcccctgatagtcaattgttagccacaggaagctggaccggcaatataaagtta
tgggatataccaaattgcaaccaccagatgacattaagagggcacgatggtttggttggt
ggtgttgattggcatcctcaggctacccttaatcagagtaaatccactgtgaatttggct
tctggttcacaagatagcacagttgcattatggtcattagaaaaggatacaccattagca
actttaaaaggtcacactcatcaagtaagacgagtcgccttccatccatcgggaagatac
ctaggtagtgcatcctttgatgaaacatggaggctctgggacgttgaaacacaagctgag
ttgcagttgcaagaaggacattcgaaagaagtatacgctttggcgttccaggatgatggt
gcattggtcggctctgccggtatggatgctattggacgtgtttgggatctcagaacgggt
agaactgcgatggttttggatggacatgccgacaagattttagcattggacttttcgcct
aatggctatcaatgtgcgacaggttctggtgatggtaaaataatgatatgggatttgaga
gctttaaaatcgatatcaaccatgcctgcgcataacatatcagttggtgatctcaagttt
tatagacaaccagagagagttctaaactctcgcaatgataaacaggatgtaaagatggat
gaaagtggagataatgaagatatgtcgcctcttgttaaagaaccttattctcatggtctc
ttcttagcaagtgctggtttcgatggctacacaaagctatggagcgcagatgactggatc
tgtcaaagatctattgccgagaactcaaaaattatgtcagttgatgtctcacgtaatggt
aaacacctcgcgactggtgaatggtcgcgatcgttcaagctattcggaactgaattgtag
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