KEGG   Wallemia mellicola: WALSEDRAFT_60691
Entry
WALSEDRAFT_60691  CDS       T03142                                 
Name
(RefSeq) RNA processing-related protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
wse  Wallemia mellicola
Pathway
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_60691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_60691
Spliceosome [BR:wse03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    WALSEDRAFT_60691
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th PRP4 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_WDR19_1st NBCH_WD40 Nbas_N Beta-prop_IFT140_1st Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N WD_LRWD1 RMC1_N
Other DBs
NCBI-GeneID: 18474102
NCBI-ProteinID: XP_006959032
JGI: Walse1_60691
UniProt: I4YAQ4
LinkDB
Position
Unknown
AA seq 499 aa
MDTEMKDFDDLVNDDKYEMGTGQELARAELQATEDMFERRRVLRTLAVPTDDNKVRERLR
AFGLPMTLFGERPEDRRSRLKSMIADMQEEAGEKAKIESEDESEEEEEFYTVGSQELLQT
RRLLAEYSIPRAKRRIEKERDDWAKPLKSIVDARKRTFEYIKSFNVLGSQVGDSRPISQV
KFSPDSQLLATGSWTGNIKLWDIPNCNHQMTLRGHDGLVGGVDWHPQATLNQSKSTVNLA
SGSQDSTVALWSLEKDTPLATLKGHTHQVRRVAFHPSGRYLGSASFDETWRLWDVETQAE
LQLQEGHSKEVYALAFQDDGALVGSAGMDAIGRVWDLRTGRTAMVLDGHADKILALDFSP
NGYQCATGSGDGKIMIWDLRALKSISTMPAHNISVGDLKFYRQPERVLNSRNDKQDVKMD
ESGDNEDMSPLVKEPYSHGLFLASAGFDGYTKLWSADDWICQRSIAENSKIMSVDVSRNG
KHLATGEWSRSFKLFGTEL
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggatacagaaatgaaggattttgacgatcttgtcaatgatgacaagtacgaaatggga
actggacaggaactagctagggctgagctgcaagctacagaggatatgtttgaaaggagg
agagtcctcagaaccctcgctgtacccacagacgacaacaaagttagagagagactcaga
gcattcggtttaccaatgaccctattcggtgaaaggccagaagataggaggagtcgtttg
aaatctatgatcgctgatatgcaggaagaagctggagagaaagccaaaatagaaagcgag
gacgaatctgaagaagaagaggaattctatactgttggttcacaagaattgctgcaaaca
cgaaggttgctagcagaatactccatcccacgagcaaaaaggagaatagagaaagagcgt
gacgattgggcaaaacctctaaagtcaattgtagacgcgaggaaacgtacatttgaatac
atcaagtctttcaatgtactcggatcacaagttggagatagtcgtcctatctcacaagtc
aaattctcccctgatagtcaattgttagccacaggaagctggaccggcaatataaagtta
tgggatataccaaattgcaaccaccagatgacattaagagggcacgatggtttggttggt
ggtgttgattggcatcctcaggctacccttaatcagagtaaatccactgtgaatttggct
tctggttcacaagatagcacagttgcattatggtcattagaaaaggatacaccattagca
actttaaaaggtcacactcatcaagtaagacgagtcgccttccatccatcgggaagatac
ctaggtagtgcatcctttgatgaaacatggaggctctgggacgttgaaacacaagctgag
ttgcagttgcaagaaggacattcgaaagaagtatacgctttggcgttccaggatgatggt
gcattggtcggctctgccggtatggatgctattggacgtgtttgggatctcagaacgggt
agaactgcgatggttttggatggacatgccgacaagattttagcattggacttttcgcct
aatggctatcaatgtgcgacaggttctggtgatggtaaaataatgatatgggatttgaga
gctttaaaatcgatatcaaccatgcctgcgcataacatatcagttggtgatctcaagttt
tatagacaaccagagagagttctaaactctcgcaatgataaacaggatgtaaagatggat
gaaagtggagataatgaagatatgtcgcctcttgttaaagaaccttattctcatggtctc
ttcttagcaagtgctggtttcgatggctacacaaagctatggagcgcagatgactggatc
tgtcaaagatctattgccgagaactcaaaaattatgtcagttgatgtctcacgtaatggt
aaacacctcgcgactggtgaatggtcgcgatcgttcaagctattcggaactgaattgtag

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