Wallemia mellicola: WALSEDRAFT_61073
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Entry
WALSEDRAFT_61073 CDS
T03142
Name
(RefSeq) Sm-like ribonucleo protein
KO
K11088
small nuclear ribonucleoprotein D3
Organism
wse
Wallemia mellicola
Pathway
wse03040
Spliceosome
wse04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_61073
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
WALSEDRAFT_61073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_61073
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_61073
03032 DNA replication proteins [BR:
wse03032
]
WALSEDRAFT_61073
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
WALSEDRAFT_61073
Spliceosome [BR:
wse03041
]
Complex A
U1 snRNP components
Sm proteins
WALSEDRAFT_61073
U2 snRNP components
WALSEDRAFT_61073
Complex B
U1 snRNP components
WALSEDRAFT_61073
U4/U6.U5 tri-snRNP components
WALSEDRAFT_61073
Complex C
U2 snRNP components
WALSEDRAFT_61073
DNA replication proteins [BR:
wse03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
WALSEDRAFT_61073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
LSM14
Motif
Other DBs
NCBI-GeneID:
18474320
NCBI-ProteinID:
XP_006959731
JGI:
Walse1_61073
UniProt:
I4Y8F1
LinkDB
All DBs
Position
Unknown
AA seq
123 aa
AA seq
DB search
MSSVPIKLVHESLGHVVTIELKSGQMYRGKLQEAEDNLNVSLQDITVTARDGRVSQLDQV
YIRGSMIKFLVVPDMLQNAPMFKRVGPNAMKGRGIGTARGRATIMRANARRGRGGPPTVG
IRR
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttccaataaagttggtacacgagtcattaggacatgtagttactattgaa
ttgaaatctggtcagatgtatagaggaaagctacaagaggctgaggacaacttgaacgtc
agcttacaggatataacggtcaccgcaagggatggtagagtttctcagttagatcaggtg
tatataagaggttctatgataaaattcctagtagtacctgacatgttacagaatgcacct
atgttcaaacgtgtcggtccaaacgctatgaagggtagaggtatcggtacagcaagaggt
agagcgacaatcatgagagctaacgctagaaggggtagaggtggacccccaactgttgga
attagacgctaa
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integrated database retrieval system