Wallemia mellicola: WALSEDRAFT_61140
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Entry
WALSEDRAFT_61140 CDS
T03142
Name
(RefSeq) RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
wse
Wallemia mellicola
Pathway
wse03020
RNA polymerase
wse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WALSEDRAFT_61140
09124 Replication and repair
03420 Nucleotide excision repair
WALSEDRAFT_61140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_61140
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_61140
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
WALSEDRAFT_61140
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
WALSEDRAFT_61140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
ChrB_N
Motif
Other DBs
NCBI-GeneID:
18474355
NCBI-ProteinID:
XP_006959854
JGI:
Walse1_61140
UniProt:
I4Y841
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MNAPNRFELFIVPDNEPKVTVVDDSRISSTSTITLNRQDHTIANLLSNEISKDKNVVFSG
YRVPHPLNPKSEIRVQTLNGTVTPKECLKDAATRLLADCGTFQDELKQEFNKISIEGLNN
DDQTMQQQPDEYYIDY
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccgaatagatttgaattatttattgtcccagataacgagccaaaggttact
gtcgttgatgattcccggatttcctcaacttcaactataaccttgaatagacaagatcac
actattgcaaacttactttcaaatgaaatttcaaaggacaagaatgtcgtgttttctggt
tacagggtgccacatccacttaatccaaaatctgaaatcagagttcagactttaaacggt
acggtcacaccaaaggagtgtttgaaagatgctgctacgagattactagcagattgtggt
accttccaagatgaattaaagcaggagttcaacaagatttctattgagggactcaacaac
gatgaccaaactatgcaacagcaaccagacgagtattatattgactattag
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