Wallemia mellicola: WALSEDRAFT_61456
Help
Entry
WALSEDRAFT_61456 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_61456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_61456
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
WALSEDRAFT_61456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
18474540
NCBI-ProteinID:
XP_006960493
JGI:
Walse1_61456
UniProt:
I4Y669
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MSTEEDKIDLKIKNLQKSAINLTKISKNLLKSDDLSFQKSIDSGFSSRCEEIEDGVVDNI
NQLIGFINNKSRHLDADDLTGDSKAVGELVDQLLEDSSINIDKHTNNYNKPTLAKDLEPS
IFNDKSIQRKPQLKWSSSIDNSDSPWKPLLTHKPNAKADLTWTTVDDRLSHPYQTEIESI
KYPAQQLKTQTPIKQGDFNQTPFKWIDNEESLNYLLDRLSTATEIAIDLEHHDFRSYRGF
VCLMQISIRGEDFIIDTLELRDQLIKLNDTFTNPAIVKVFHGADSDIVWLQRDFGVYIVN
MFDTYHATKVLGFSQHSLASLLIKFCGYTPDKRYQRADWRKRPLTNKMLEYARSDTHYLL
YIYDMLRNTLIEKSSKKNDMLKDVLQRSEQVSLKTHHRDPYDYDTGKGFGGWYNLATKWN
KVVEPPLLEVFRRLHQWRDQIARKEDESVHVIFSNHQLYDLALKQPKTPQEITNVFQKKV
PQFVRIHLKDVAQCINSGVEFAKNNSDKLPARVVPKSLLQPNNVHLPFKTGLDFDLWNIN
QSNSANSASQTSLSTSTRSKLFGEDSTKQAPQASTSKLFGDVTTTVLPKKSKTMDSISSS
FKLISLIPHSTSNTEYDLDAFDEYKRPITQKAPPMPARVDEVLKEDKQKMEQEKKESEDS
SMAEVPYKSKAERMADNIPIDAGITADDIATIGKQPEKKRKRKDKGEKKEKANAKDKSDK
KDKKGKLEVPEFNYDNEESVLDRPLDDLSQSTKKPKKQRIKANLEGQFRRPGSSKTMQSS
GNRSHTFKK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaggaagacaaaatagatttaaagataaaaaatctacagaaatccgcgata
aatttaacgaaaatatctaaaaatttattaaaatctgatgatctctcatttcagaagagt
atagactctggattcagcagtagatgcgaagaaatagaggatggcgtggttgacaatata
aatcaattaattggtttcatcaataacaagtcaaggcacctagatgcagacgatctgacg
ggcgatagtaaagctgtcggtgaactcgttgatcagcttttagaagacagttctatcaac
atagacaagcatactaataactacaataagccaactctagctaaagatttagaacccagc
atttttaacgacaaatcgatacaaaggaaacctcagttgaaatggtcatcctccattgat
aattctgatagtccctggaagccactacttactcacaaaccaaacgccaaggcagatttg
acctggacgaccgttgatgatagattatcacacccctaccaaacagagattgagtcgatt
aaatacccagcgcagcaattaaaaactcagacaccaatcaagcagggtgatttcaatcaa
acgccttttaaatggatagacaacgaagaatctctcaactacttactagataggctcagt
acagctacagaaatagccattgatttggagcatcacgacttcagatcttatcgtgggttt
gtttgtttaatgcaaatttctatcagaggagaagatttcattatagatacactagaactt
agagaccagcttattaaactcaacgatacatttacaaacccagcaatcgttaaggttttc
catggtgcggactctgatattgtctggttacagagagattttggtgtctatatcgttaat
atgtttgacacgtatcatgcaactaaggttttagggtttagtcaacattcattggcgtct
cttttgataaagttttgcggttatacaccagacaaacgttatcaaagagcagattggcgt
aagagaccgctcaccaacaaaatgctggaatatgcaagatcagatactcattatttgtta
tacatctacgatatgttacgcaacacacttatcgaaaagtcatcaaagaagaatgacatg
ttgaaagatgttttacaaagaagcgagcaggtgtcactcaaaacccatcatagagatcct
tacgactatgataccggtaaaggcttcggtggttggtacaaccttgcaaccaagtggaac
aaagttgttgaaccacctcttcttgaagtattccgtagattacaccaatggagggatcag
atagcaagaaaggaagatgagagtgttcatgttattttctctaaccatcaattatatgac
cttgcattgaaacaaccgaagacacctcaggaaatcacgaatgtcttccaaaagaaggta
ccgcaatttgttagaatacatttgaaggatgtcgctcaatgtatcaactcaggtgttgag
tttgcgaagaacaatagtgataaattaccagccagagtcgtaccaaagtcgttgctccaa
cctaataatgtccatttaccattcaaaactggattagactttgatttgtggaatataaat
caatctaattccgcaaattctgcttcccagacttccctgtctacttctactcgctcgaag
ttgtttggtgaagatagcacaaagcaagcaccacaagccagcacatcaaagttgtttggt
gatgttaccacgacggtattgcctaagaagagcaagactatggatagtatttcctcttcg
tttaagcttatttcacttattccgcattcaacctctaatacagaatatgaccttgacgca
ttcgatgagtacaagcgtccgattacacagaaggcaccacctatgccagctcgtgtggat
gaggtactcaaggaagataagcaaaagatggaacaagagaagaaggagagtgaagattca
agcatggcagaagtgccatacaagagtaaagcggaacgaatggcggacaatataccaatt
gatgctggtatcaccgcagatgacatagcgacaattggtaaacaaccagagaagaagcgc
aaacgcaaggataagggagagaagaaagagaaggccaatgcgaaagataagtcagataag
aaagacaagaaagggaaactcgaagtacctgaattcaattacgataatgaggaaagtgtg
cttgataggcctctagatgacttatcacagtcaacgaagaagccaaagaagcaacgcatc
aaggcaaacttggagggtcaattcagaagaccaggatcatcaaagacgatgcaatcttcc
ggcaatcgctcacatacattcaagaagtaa
DBGET
integrated database retrieval system
