Wallemia mellicola: WALSEDRAFT_61480
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Entry
WALSEDRAFT_61480 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_61480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_61480
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_61480
mRNA degradation factors
5'-3' decay
Decapping complex
WALSEDRAFT_61480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
SNF
DUF6030
Motif
Other DBs
NCBI-GeneID:
18474556
NCBI-ProteinID:
XP_006960546
JGI:
Walse1_61480
UniProt:
I4Y604
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MKDDALPTVSFTDTLKMHTPDILDSPQIDFSSALEPSLEQSLDRTHISQPAVVPPPMPVQ
QMQQVQQMQQLHHMQHIQQLQQQQMQQPDVVFPALPTQMESIPTNHSETMEKIIRDQELQ
DLKRRRKAIKISAMSNFNHLMTPSDKSYILRMQLSSLATADPYTDDFYAQIYSILMRKNQ
GVLNVGGMALSVAAGSNQSGMGAGAAKKLRDQIDKIVRSKREKQEDNTNKQSQEDYLVGA
LGKTSSKTNSRAPRQVLQVPSNESTKASAKDVLSSLEKGGFASSLLNGPQPALTRRQSLI
ASEKLYDYVLNLENLRRNQPQPIQPTEENPNPEQPYEEMSRWEQEYNFNVDELWKGLRVM
EPLELSNPHPFISLIAITKTSKLLPRAIRHLDQQQVLTINTLIIACFSQYLRFNQDSNLV
EAFLSGIVPQFMSMITGVSLRLVAGMLALFVERNDVVQVAQSKPGLAFLTILLSRAEILK
QIPMGIENAPNPEEISQWDQIFSLFFSKLLPCLPSLFPSQRHKTARAFGMGAAMPSGSLE
ESILLDSEDESVWRFLAAIALNSDNIQQSTLVQEVRDVVQENVIAAQQAWVPPQSATKKI
GNVNVFLHALGLDVSQLGV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgatgcactaccaacagtcagtttcacagatacgctaaaaatgcacacacca
gacattttggactctccgcagattgattttagtagcgcattagagcctagcttagagcag
tctctcgataggacccacatctcgcaaccagctgtcgtgccaccaccaatgccagtacag
cagatgcagcaggtacagcaaatgcagcagttacatcatatgcaacacatccagcaactt
caacagcagcaaatgcagcagccagatgtcgtattccctgcactcccaactcaaatggaa
tcaatccctactaaccactctgaaactatggagaagatcattagagaccaggaattgcaa
gatttgaagagacgcagaaaagcaatcaagatttctgcaatgagtaacttcaaccacctt
atgacaccttcagataaatcttatattctcagaatgcaattatcctcattagcaaccgca
gacccatacactgacgacttctacgcccaaatatattcaattctcatgcgtaaaaaccaa
ggcgttttgaatgtaggaggtatggcattgtctgttgcagcaggttcaaaccaatccgga
atgggtgctggtgcagccaaaaagcttcgcgaccagatcgacaaaattgtcagaagcaag
agagagaaacaggaggataacaccaataaacaaagtcaagaagattacctcgttggtgca
ttaggtaagacatcctcaaagaccaactcaagagctccaagacaggtcttgcaagtacct
tcgaatgaatcgacaaaagcatccgctaaggatgtcctctcgtcactcgagaaaggtggt
ttcgcaagctcactgttgaacggtccacaacctgcacttacacgtcgtcaaagtttaatt
gcatctgaaaaactctacgattatgtccttaacctcgagaatttacgtagaaaccaaccc
caaccaattcaaccaacggaagagaacccaaatccagagcaaccatacgaggaaatgtca
cgatgggagcaagagtacaactttaacgttgatgaattgtggaagggtctcagagtaatg
gagccacttgagttgtcaaatccacacccatttatttcattaatcgcgattacaaaaaca
tcaaagttactcccaagagccatccgccatttagatcaacaacaagtgctcactattaat
actctcataattgcttgctttagtcaataccttagatttaatcaggacagcaatctcgtt
gaggctttcttatctggtatcgttccacaatttatgtctatgattactggtgttagtttg
agattagttgctggtatgcttgcattgtttgttgagcgtaatgatgttgtacaggttgca
caatcaaagccaggattagcattcctcactatcttattgagtagagcggagatattgaag
caaattccaatgggaattgaaaatgcaccaaatccagaagaaatttctcaatgggatcaa
atattctcactcttcttcagcaaattgttaccatgtcttccaagtttattcccatcacaa
cgtcataagacagctcgggcatttggaatgggtgcagctatgccaagtggatcactcgaa
gaaagtatcttattagacagtgaagatgagagtgtatggcgtttccttgcagcgattgca
cttaatagtgacaacattcaacaatcaaccctcgtacaagaagtcagagatgttgttcaa
gagaacgtcatagctgctcaacaagcttgggtaccaccacaaagtgctacaaagaaaatc
ggtaatgttaatgtattcctccacgcccttggtttggacgtcagccaacttggtgtgtag
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