Wallemia mellicola: WALSEDRAFT_61516
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Entry
WALSEDRAFT_61516 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
wse
Wallemia mellicola
Pathway
wse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
WALSEDRAFT_61516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_61516
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_61516
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
WALSEDRAFT_61516
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
WALSEDRAFT_61516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCCH_9
zf-CCHC_3
zf-CCHC_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
18474577
NCBI-ProteinID:
XP_006960615
JGI:
Walse1_61516
UniProt:
I4Y5U7
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MGCPRGNNCPYRHTDPAPKNFEPIPPLPTNLRERERAVTVCKHWLRGLCKKGDACEFLHE
YDLRKMPECWWFVKWGWCANGEECLYRHTSLEGRKNECPEYLRGFCRRGPYCPFKHIRRA
ACPAYLAGYCPDGPYCARGHPKSRLPERYTLEDADPPPVPDEELGPPPGYMGYSYERGPW
ESRRFGAGFGGEPGQGIAHGIGPGGVSHGRPQSYRGEKSLVTPNTGSGPGEPFIRNVNQK
PRDNQNAQVRRGLENILCFKCGQHGHYANQCPNKIAAGRQRHQQH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtcctagaggcaacaactgtccttatagacacacagacccagcaccaaagaac
tttgaaccaattccgcctcttcctacaaacttacgtgagagagaacgcgctgtcacagta
tgtaagcattggctgagaggattgtgtaaaaagggagatgcatgcgaatttctccacgaa
tatgatttgaggaaaatgcctgaatgctggtggttcgtcaaatggggatggtgcgctaac
ggagaagaatgcttatacagacatacaagtttggaaggtagaaagaacgagtgtccagag
tatttgcgaggtttttgcaggagaggaccatattgtccattcaagcacatacggcgggca
gcgtgtccagcatacttagctggatattgtccagatggaccatactgtgctcgtggacat
ccaaaatcaagactacctgaacgatacacactcgaggatgcagatccaccaccagtccca
gacgaagaattgggtccaccacctggatacatgggttactcgtacgaaagaggaccttgg
gaatcccgtagatttggtgctggtttcggtggtgaacctggtcaaggtatagcccacggt
attggtccaggcggtgtctctcatggtagaccacaatcgtacagaggtgaaaagtcttta
gttactccaaacactggttcaggtccaggtgaaccattcattagaaatgttaatcaaaag
ccacgcgataaccaaaacgcgcaggtgcgacgtggattagaaaatatcctatgtttcaag
tgtggacaacacggccactatgctaatcaatgccctaataaaatcgctgctggtcgacaa
aggcatcaacaacattaa
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