Wallemia mellicola: WALSEDRAFT_61576
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Entry
WALSEDRAFT_61576 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_61576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_61576
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_61576
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
WALSEDRAFT_61576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF1192
WKF
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
18474615
NCBI-ProteinID:
XP_006960728
JGI:
Walse1_61576
UniProt:
I4Y5I9
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MAQRKLLTEVDRTLKKVSEGVELFESMYEKLQTSNNQTQKEKLEVDLKTQIKKLQRMRDS
IKTWISSSDIKDKSELMSSRKLIETQMERFKACEKEIKTKAFSKEGLIAATRLDPKDQIK
QECSNWLGHFVDELSRQIETAEAEIEQLSGATSKRSKKSNATQERVSELEQLNERRNWHI
SRLELTMRLLENDQLSVDQINNIKDDIQYFVESNGEEEFEEDEGIYDELNLDEEEQMYGM
GTANAQPNDEQASSHDSISVTDEPVQPPSKPSKKSSIDEDSLTPKKTKKPSITSPDSSNN
GAIPAPNFNQPPVAKSTASPAAQQAKPVPAPPTIKYATAAANAVANTASSAPVDDEHIEE
QPRESQDQLESVEVDGSQQEDGQSIPPTQVQRSESEEQSQTSTASAKGLPYVLSDLAASF
ENAKQKSRSNSPNRLHQALESTMSGVPEPSDADRPRYYVPKNLWTSPSYYPQVPKKDLEH
SNLFSRLETDTLFYIFYYMQGTYQQYLAARELKKQSWRFHKQYLTWFQRHSEPNQITDDY
EQGAYIYFDWEGTWCERKKNDFKFDYVYLEDTLQ
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcgtaaattattgacagaagtggataggacgctaaagaaagtatcagaaggt
gttgaactctttgagagtatgtatgagaagttacagacgtcaaacaaccaaacgcagaag
gagaagcttgaagttgatttgaagacgcagatcaaaaagcttcagcgaatgcgtgactct
atcaagacctggataagctcaagtgatatcaaagataaatctgaattgatgtcgtctagg
aagctaatagaaactcaaatggaacgtttcaaagcttgcgagaaggaaataaaaacaaag
gcattctccaaagaaggtctaatagcagctactcgtctcgatccaaaagatcaaataaag
caggaatgttcgaattggctgggacacttcgtcgatgaattgagtcggcagatcgaaaca
gcagaagcagaaatcgagcagctctcaggtgcgacatctaagaggagtaaaaaatcaaac
gctacgcaagagagagtctcagagttagagcagctaaacgaacgtcgaaattggcacata
tctaggctagaattgacgatgagattgcttgagaatgatcagttaagtgttgatcagata
aacaacattaaagatgatattcagtactttgtcgaaagtaatggtgaggaagagtttgaa
gaggatgaaggaatctacgacgagctcaaccttgatgaggaggagcagatgtatggtatg
ggtacagcgaatgctcaacctaacgatgagcaagcttcttctcatgattcaatatctgtc
acagatgagccagtacagccgccaagcaagccatcaaagaagtcatcaattgatgaggat
agtctgacgccaaagaaaacaaagaagccttcaatcacttctcccgacagcagtaataat
ggtgcaattccagcaccaaatttcaaccaacccccagttgcaaaatctactgcttctccc
gctgctcaacaggcaaaaccagttcctgctccacctacaatcaagtatgcaacagctgct
gctaatgcagtagctaacacagcatcatcagcaccagttgatgacgaacatattgaagaa
caaccaagagaatcacaggatcaactagagagcgtggaagttgatggaagccagcaagaa
gatggtcaatcaatcccaccaactcaagttcaaaggtcagaatctgaagaacaatcacaa
acatctacagcatctgcaaagggattaccatacgtattatcagatttagcagcttcattc
gagaatgccaagcagaaatcgagaagtaatagccctaacagacttcatcaagcgcttgaa
tcgaccatgtctggagtacctgaaccatctgacgcagatcgtcctcgttattacgtacca
aagaatttgtggacttcaccttcttattatccacaagtacctaagaaggaccttgagcat
tcgaatttgttttcaagattggaaacagatacgctcttctatatcttctactacatgcaa
ggcacttaccaacaatacctcgctgcacgtgaattgaaaaaacagagttggagatttcac
aagcaatatttgacctggttccaacgacactcggagcctaatcaaataacagatgattat
gaacaaggtgcatatatttattttgattgggaaggtacctggtgcgagcgcaagaagaac
gacttcaagttcgactatgtctatttggaagatacgctccagtga
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