KEGG   Wallemia mellicola: WALSEDRAFT_65840
Entry
WALSEDRAFT_65840  CDS       T03142                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12880  THO complex subunit 3
Organism
wse  Wallemia mellicola
Pathway
wse03013  Nucleocytoplasmic transport
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_65840
  09122 Translation
   03013 Nucleocytoplasmic transport
    WALSEDRAFT_65840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_65840
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_65840
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     WALSEDRAFT_65840
Spliceosome [BR:wse03041]
 Complex C
  Other components
   EJC/TREX
    WALSEDRAFT_65840
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    WALSEDRAFT_65840
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_ACSF4 Tricorn_2nd Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_DCAF12 eIF2A
Other DBs
NCBI-GeneID: 18475056
NCBI-ProteinID: XP_006959977
JGI: Walse1_65840
UniProt: I4Y7V6
LinkDB
Position
Unknown
AA seq 350 aa
MASLTNQGDFPYDVQFPSRGILPPDFKAWGSASARAHKDRVNAVGWSNDGKRLGSVSSDK
SLRIWPEKALDSGRPDAKMATAMIGHSDKVVQLAWHPLDSNLLTTVSLDKTIRCWDIRAR
APTTTLQLSSAAYNLAYHPDGQTLAAGAETIGFYDLRHPTGPQRTIERQQQADRINHDFR
WSKDGELFTICCNDGSFEAYLYPSFELEFSDKGHTSDATKIEFTKDRRYMLTGGGDAVVN
VWDLEEWICLRSINQIEGLVRSISVNSISECVAIGTDDRNISIASIHTGETLHSFKTGAK
TKSLAWHPSKLLLAYASEDITREEHMREPGMMNISSSVRVWGKGVGRPSA
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggctagtctaacgaatcaaggggatttcccatacgatgtacaatttccatctaggggt
attctacctcccgatttcaaagcatggggaagcgccagcgctcgcgcccacaaagataga
gttaatgctgtaggctggagcaacgatggtaaaagactgggtagcgtttctagcgataag
tctcttagaatctggccggagaaggcgctcgatagcggtagaccagacgctaaaatggca
acagcgatgattgggcatagcgataaagtagttcaattagcttggcatcccttggattct
aatctacttacaacggtttccttggacaagacaataagatgttgggatatcagagctaga
gcacctacaactaccttgcagctatcatcagctgcatacaacttagcctaccatccagat
ggacagactttagcagcaggtgctgaaacaatcggcttctacgacttacgccatccaact
ggaccccaaaggacgatagaaagacaacaacaagcagaccgtataaatcatgattttaga
tggtcaaaagatggtgaattattcactatttgctgtaatgacggttcctttgaggcatat
ttatacccttcatttgaattggagtttagtgataaaggacacacatctgatgcaacaaag
atagagttcacaaaggacagacggtacatgttgactggcggtggtgatgcagttgtcaat
gtttgggatctcgaagagtggatctgtctgcggtcgatcaatcaaatagaaggactagtg
agatcaataagcgtgaattcaatttctgagtgtgtcgcaattggtacggatgataggaat
ataagtatagcatcgatacacacaggtgagacactacattcatttaaaactggagcgaag
acaaagtcactcgcatggcaccctagcaaactgctcctagcttatgcaagtgaggatatt
acaagagaagaacacatgagagaacctggaatgatgaatatatcatcttctgtaagagta
tgggggaagggagttgggagaccttcagcgtaa

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