KEGG   Wallemia mellicola: WALSEDRAFT_65907
Entry
WALSEDRAFT_65907  CDS       T03142                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14962  COMPASS component SWD2
Organism
wse  Wallemia mellicola
Pathway
wse03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    WALSEDRAFT_65907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_65907
   03036 Chromosome and associated proteins [BR:wse03036]
    WALSEDRAFT_65907
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     WALSEDRAFT_65907
Chromosome and associated proteins [BR:wse03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     WALSEDRAFT_65907
    COMPASS/SET1 complex (yeast)
     WALSEDRAFT_65907
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 18475066
NCBI-ProteinID: XP_006960050
JGI: Walse1_65907
UniProt: I4Y7G7
LinkDB
Position
Unknown
AA seq 348 aa
MSKISLNADIMKSFKPSKAFTGYCQEDKQFTSIAFDDTGSTCVTAASDDGFHIFDARLGK
HQKHFKSEKYGIDLPCFTHASSTILYASTKVDNSIKYHSLHDNTYLQYFRGHNGKVNSLE
MSPVSDQFLSASSDDTVRLWDIRSPQCMGLLNIQGNSTAAWDPTGLIFAVSLYKESSILL
YDTKEFDKAPFMTFVLQDKDPKVPGRSIYPHPTCIKFSTDGNYMLVGTNSYYHYILNSFT
GQIYYRLTGHETFSSSQLHRDMLSWTPDSNYVVGGSKNGKIFVWEIPPFTEQKDHEARNL
SPIVSTDNHNKEPSKVVSFNPKMIMMATAAGSELDFWLPMQDSRRSDH
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtccaaaatatcgcttaatgcggacattatgaaatcgttcaagccttcgaaagcattt
actggctactgtcaagaagataaacaattcactagtatagcattcgatgatacaggttca
acttgcgttacagcagcatctgatgacggtttccatatattcgacgctagactcggaaaa
catcaaaaacactttaaaagtgagaaatacggcatagatttaccttgtttcactcacgca
agttctactattctttacgcttcaacaaaggtcgataactcgattaaataccattctcta
catgataacacttatctgcaatactttagaggccataatggtaaagttaattcactcgaa
atgagtcctgtcagcgaccagttcttatcagcatccagtgatgacaccgttagattgtgg
gatatacgtagcccacagtgtatgggtcttctcaatattcaagggaattcaacagcagct
tgggatccaactgggttgatatttgcggtctcactctacaaagaatcttccattttgcta
tacgacaccaaagaattcgataaagcgcctttcatgacgttcgttttgcaagacaaagat
ccaaaagtacctggaagatcgatctaccctcatccaacctgtatcaagttctctacagat
ggtaattatatgttagttggtacaaatagctactatcactacatattgaactcattcacc
ggtcaaatttactaccgtttgacgggacatgaaaccttctcaagtagccagctacacagg
gatatgttgagttggacaccagacagtaattacgttgttggtggttcaaagaatggtaaa
atattcgtatgggaaataccgccttttactgagcaaaaagatcacgaggcgaggaatctt
tcaccgatagtcagcacagataatcacaataaagagccaagtaaagttgtttcatttaat
ccaaaaatgatcatgatggctacagcagcaggatctgaattagatttttggttacctatg
caagacagtcgtcgtagtgatcattaa

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