Wallemia mellicola: WALSEDRAFT_67754
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Entry
WALSEDRAFT_67754 CDS
T03142
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
wse
Wallemia mellicola
Pathway
wse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WALSEDRAFT_67754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_67754
Enzymes [BR:
wse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WALSEDRAFT_67754
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
WALSEDRAFT_67754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18475291
NCBI-ProteinID:
XP_006956913
JGI:
Walse1_67754
UniProt:
I4YFX2
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MSFNTLERERTFKNPSNKGTNYPVLQELVKPHVDSFNMLFKDSNGGEGLLDKALRDIPSR
VIIDDKQRLELTYTQLTIAKPMVLDKDKNSTDRRVFPFEARERLTTYKSRMSVKIQVKVN
GEIKSEFIRECGSVPVMVRSERCNLQKMTSAELVQKHEESDEMGGYFIINGNEKLMRLLV
VPRRHYVTSIIRPSFANRGPTYTEYGVQIRCVRPDQTAATNTMHYLSNGGATLRFAWRKN
EYMIPVVMVLKALSSASDRDIFEGIIQKDYDNTFLTDRVELLLRGFKPFKLYTREQCLHF
LGSKFRVVLGCPEDWTDIQVGQYLIDRCILVHLQSPQDKYRMLLYMLQKLYSLVSGESCP
DNPDSPQLHEVLMPGFLYGQIIKEKLDECLIAATAQIRQDLRRQVSSANVSDDKYVNKVI
QRTNFDIGQKLNYFLATGNLVSPSGLDLQQATGFTIMAEKLNFYRYLAHFRCIHRGAFFA
ELKTTAVRKLLPEAWGFLCPVHTPDGAPCGLLNHLSRSCKVTTENLEESASNIPSLLSSL
GMIQPFVNTVDRRNSVAIQLDGRIIGWASTEDVKHMAEALRIWKTEKLHDVPLNLEIGLV
PSSKGGQYPGLYLFTSRARMMRPVKYLANGKLDHLGSFEQVYMDVACVPKEIEKGISTHV
EYTPTNVLSVVANMTPFSDFNQSPRNMYQCQMAKQTMGTPSTAIMRRTDNKLYRIQNGQT
PIVRPKLHAHYGMDNFPQGANAIVAVLSYTGYDMEDAMIINKSAHERGFGYGTVYKSQIV
DLREMRGASKSRSAPTLHFGLGVDAKQEWRETLDDDGIIPSGVKVTSGDPICAYIDETTG
RTMVEKYKGDEDAYIDEIRLLGSDGGDTELQKIHFKIRIPRSPVVGDKFSSRHGQKGVMS
QRWKKIDLPFSESGLQPDVIINPHAFPSRMTIGMFVESIAGKAGALHGLAQDGTPFNFNE
KDTPVEYFGEQLKSAGYNYHGNEPMYSGVTGEEFPADIYIGCVYYQRLRHMVNDKYQVRT
LGPVDQLTRQPIKGRKRHGGIRLGEMERDALIAHGTSFLLQDRLMNCSDYSTTWVCRDCG
SLISLGYTDERDMAASQLPQGPTGEYCRVCRQAQLEKDQGELDGEVRQVERKGDIILPLS
KDLNIGKGGNMDVVAVPYVLRYLASELACMGIRMSVELS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaataccttagagagggagagaacatttaaaaacccctcaaataagggtaca
aactatcctgttctacaggaattagttaagccgcacgtagacagtttcaacatgcttttt
aaggattcaaacggtggagaaggtttattagataaagcattgagagatataccttcaaga
gttattatagacgataagcagaggttggaattaacatacacacaactcacgattgcgaaa
ccaatggtactcgacaaggataagaactctacagacagacgtgtcttcccatttgaggct
agagagagattaacgacctacaaatctcgtatgagcgtaaaaatacaagtcaaagtgaat
ggtgaaattaaatcagaatttatcagagaatgcggttcagttcctgttatggtcagatct
gagagatgcaatcttcaaaagatgacatccgcagaactcgttcaaaagcacgaagaatct
gacgaaatgggtggttactttattatcaacggtaatgaaaaactgatgagattactcgtc
gtaccaagaagacattacgtaacttcaattatcagacctagtttcgctaatagaggtcca
acatacactgaatacggtgtacaaattcgttgcgttagacctgatcaaaccgccgcaaca
aacaccatgcattacctcagtaacggcggtgcaacactcagatttgcctggagaaagaac
gagtacatgattccagtcgtaatggtattaaaagcactcagttctgcttctgatagagat
attttcgaaggtatcattcaaaaggactacgataacactttcttaactgatagagttgag
ttgttattgagaggtttcaagccattcaaattatacaccagagaacaatgtttgcacttc
ttaggctcaaagttcagagtagttttaggttgcccagaagattggactgatattcaagtt
ggtcaatacctcattgataggtgtatcttggttcatctccaatctcctcaagataaatac
agaatgttgctttatatgttacaaaagctttattcattagttagtggtgaaagttgtcct
gataatccagattctcctcaacttcacgaagtactcatgcctggtttcttatatggacag
atcatcaaggagaagttagatgagtgtcttatcgcagcaactgctcaaattagacaagat
cttagacgacaagtaagctcagccaacgtcagcgatgataaatatgtcaacaaggttata
caaaggactaactttgatatcggtcaaaagctcaattacttcttagcaactggtaaccta
gtttcaccttctggtctagatttgcaacaagctactggtttcacaattatggcagaaaag
cttaacttttatagatatctcgcacactttaggtgtatacatagaggtgctttctttgca
gaattaaagacaacagctgttagaaagcttctgcccgaagcttggggtttcttgtgtcct
gtacacactccagatggtgcaccatgtggtttgctcaatcacctttcaaggtcatgtaaa
gttacaacagagaacttagaggagagcgcttcaaatattccatcgttattgtctagtttg
ggtatgattcaaccatttgtaaacacagtagacagaagaaatagcgttgcaattcaatta
gatggtagaatcatcggttgggcttcaacagaagatgttaaacatatggctgaggcttta
cgtatttggaagacagagaagcttcacgatgtaccattaaacttggaaattggtttggta
ccttcatcgaaaggtggacaataccctggattatacttgttcacttcaagagctagaatg
atgagacctgtcaagtacctcgctaatggtaaattagatcatctcggttcattcgagcaa
gtttacatggatgtagcatgtgtaccaaaagaaattgaaaagggaatttctacacacgtt
gaatacacaccaacaaacgttttatcagtagtcgcaaatatgactccattctcagatttc
aaccaatcaccaagaaatatgtaccaatgtcaaatggctaaacaaactatgggtacacct
tcaactgcaatcatgagaagaaccgataataagttgtatagaatacaaaatggtcaaacg
ccaatagtcagaccaaaattacacgctcattacggtatggataacttcccacaaggtgca
aatgccattgtcgccgtactttcatacacaggttatgatatggaagatgctatgattatc
aacaaatcagcacatgagagaggtttcggttatggtactgtatacaaatcgcaaattgta
gacttgcgcgaaatgagaggagcatcaaaatcaagatcagcaccaactctacacttcggt
ttgggtgttgacgcaaagcaagaatggagagaaactttagatgatgatggtatcattcca
tcaggagttaaagtaacatctggtgatccaatttgcgcctacatagatgaaactaccggc
agaacaatggtagaaaaatacaaaggagatgaagatgcctacatcgacgaaattcgtctc
ttaggctctgatggtggtgatactgaacttcaaaagatccacttcaagatacgtatacct
agatctccagttgttggtgacaagttcagttctagacacggacaaaagggtgttatgtca
caaagatggaaaaagattgatttaccattctcagaatctggattacaacctgatgttatt
atcaacccacacgctttcccatctagaatgactatcggtatgtttgttgagtctatagca
ggtaaagctggtgctctccacggtttggcacaagatggtacaccattcaacttcaatgaa
aaagatacgcctgttgaatacttcggtgaacaattaaagtccgctggttacaactatcat
ggaaatgagccaatgtattccggtgtaactggtgaagagttccctgcagacatctacatt
ggatgtgtatactatcaaagattgagacacatggttaatgacaagtatcaagttagaaca
ttaggtcctgttgatcaactcactcgtcaaccaattaagggtcgtaaacgtcatggtggt
attagattaggagaaatggaaagagatgcgcttatcgctcacggtacatcattcttgttg
caagatagattgatgaactgctcagattactcaactacatgggtatgtagagattgtggt
agcttgatctcactcggatacaccgacgagagagatatggcagcttcacaactcccacaa
ggaccaactggagaatactgtcgtgtatgtcgtcaagcacaattagagaaagatcaagga
gagcttgacggtgaagtcagacaagttgaacgtaagggtgatataatattaccattatct
aaggatttgaatattggtaaaggtggaaatatggacgtcgttgccgtaccatacgtattg
agatatttggcttcagagttagcctgtatgggtattagaatgtcggttgaattatcataa
DBGET
integrated database retrieval system
