Wallemia mellicola: WALSEDRAFT_68586
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Entry
WALSEDRAFT_68586 CDS
T03142
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_68586
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_68586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_68586
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_68586
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_68586
mRNA degradation factors
5'-3' decay
Lsm complex
WALSEDRAFT_68586
Spliceosome [BR:
wse03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
WALSEDRAFT_68586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
18475431
NCBI-ProteinID:
XP_006957917
JGI:
Walse1_68586
UniProt:
I4YDS3
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MSSVVQSDTKGSPSAFLKAIVGKSVVVKLNSGLLYTGILQCLDGYMNLVITDVRESSGIA
GSPITSTYGEAFIRGNNVLYISAAEAL
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagttgtacagagcgatacaaaaggctcaccttctgctttcttaaaggcaatc
gttgggaagagtgtcgtcgttaaactcaattctggtttattatacaccggtatcttgcaa
tgcttagatggttacatgaatctggttattactgacgtaagggaatcttctggtatcgct
ggttctccaattactagcacatatggtgaagcattcattagaggaaataatgtactatat
atatcggccgcagaggctttgtaa
DBGET
integrated database retrieval system
