Wallemia mellicola: WALSEDRAFT_68908
Help
Entry
WALSEDRAFT_68908 CDS
T03142
Name
(RefSeq) ARM repeat-containing protein
KO
K14327
regulator of nonsense transcripts 2
Organism
wse
Wallemia mellicola
Pathway
wse03013
Nucleocytoplasmic transport
wse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
WALSEDRAFT_68908
03015 mRNA surveillance pathway
WALSEDRAFT_68908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_68908
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
WALSEDRAFT_68908
mRNA cycle factors
P-body specific factors
WALSEDRAFT_68908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
18475489
NCBI-ProteinID:
XP_006958343
JGI:
Walse1_68908
UniProt:
I4YCF8
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MIDGDVIAKHKNLRDLNLKAYTEIEDSSSAKLDSSLKRHTAFLKRIKLGLGAENAAANIK
DIQQLSLSKHVEEIVANIPEGVLKCKSEKDIWAAVEIISALHQRFPQSFTTPLSTLLSTA
LNPPNKAQLAQSTPEQKEKDEIARVNRQRPILRVTGELYLVGVLLDPPVKKSTKETDSAK
PPDGWLFIKLKELLATDKDHANIPILISFIKYFGNLIYGHGGPELRFVDGHTQDRFRSLS
AAYYETVSRKLVKEHLKLQEQDKRNHEAYIKSGEIFEDRQQNYEKLTKVYEKLLNSTQTL
SELLHIAMPELPKEQSKGLGGLVVADGSTAFNRETEEYDSTIGKWEDEESKNFYEDVLDL
ADIVPPSVLASVNAKTSEQNEQTADVTETQKQAEVEEQQQKEEIVNTINTSNDEPEEGMS
AGPAAQLNALFAKLPEMNNRAMIDQVAVEFAMFNSKAARKRAAKSIASVPRNRSDVLPYY
ARLTAILSKHMPDIGKGVVDLLDDEFRYLQRKKNLVKELAESRTKNARFISELTKFAVVP
THYILHCYKVLLDDFTGVNVDVLAIFLETCGRYLLRSEETSEKMKIFLDLMKRKQQLQHL
DQRQQLLLENAYYQCNPPERAARPEKYRSPIELFIRHLIYDVLARKSIDKVSKLLRKLHW
EDPDVIRVLLNVFTKVWKIRFSSISLLAILVYDLQRFHPEFCVMVVDKVLDDIKTGVEQN
IFKYNQRRVSSIKYLGELYNYRSVHSNQIFDTLWTLVTFGHPGGRPLPGLFTPLDVSTDF
FRVRLVCTLLDTCGTCFDQGNQKKRLDYFLTFFQMYVTTKVSLPMDIDFMYTDTLEALRP
NMKISRTFEEAVTAVDEMISMDSEINQADDIYEGVYDDDESDNEENGIREGAAPIEQAED
EIEGVVDGDDREAEVEEDSDSDSELDENDQPDDDNDQDVVLREKEAAEIPAEDEDEFNRE
LAKMATDNSDSKKVDKRALFDLSLPMIKKSSMTQQESEERDPSKMKFTVLTKKGTKQQTK
TVDVPSESALAVNSRTNALQDQYEQAQLKKLVLDYEKRDAQQQDVDERKRWDNLSKATGV
KINFKQET
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgattgatggagatgtgatagctaagcataagaatctacgcgatttaaacttgaaagca
tacactgaaatagaagatagttcgtctgcgaaattagattcatctctcaaacgacacaca
gcgttcttaaagcgtattaaacttggtttaggagcagagaacgcagctgctaatataaag
gatattcaacaactcagcttatcgaagcacgtcgaagagatcgtcgcaaatatacctgaa
ggtgtactcaaatgcaaatctgagaaagatatttgggcagcagttgagatcatctcagct
ctccaccagcgattccctcaatcattcacaactccattaagcactctcttatcaacagca
ttaaaccctcctaataaagctcaactagcccagtcaacccctgaacaaaaagagaaggat
gagatcgctagagtaaaccgccagagaccaatcttgagagttacaggagagctttattta
gttggtgtgttgttagatccaccagttaagaaatctacaaaggaaacagattccgcaaaa
cccccagatggttggctatttatcaaattgaaggaactcttggccaccgacaaagatcac
gctaacattccaatattgatatcgtttatcaaatactttggcaacttgatatacggacat
ggcggtccagagcttagattcgttgatggtcacacccaggatcgcttcagatcactcagc
gctgcatattacgagactgtctctagaaaactcgtgaaagagcacctcaaattacaagaa
caggacaagagaaatcatgaagcatatattaagtctggtgaaatctttgaagacagacaa
caaaattatgagaagcttacaaaagtctacgaaaaacttctgaattcaacgcagacactc
tcagaattactgcatatagccatgcctgaacttccaaaggagcaatcaaaaggtctcggt
ggtctggtcgttgctgatggaagtaccgctttcaacagagagacagaggagtacgattca
acaataggtaaatgggaagatgaggagtctaaaaacttttacgaggatgtcctagatttg
gccgatattgtaccgccgtctgtcttggctagtgttaacgccaagacgtctgaacagaat
gaacaaacggctgatgtgaccgaaactcaaaagcaggctgaggttgaagagcagcagcaa
aaggaagagattgtcaatactatcaacacatcaaatgatgaacctgaggaagggatgtca
gctggtcctgctgcccagttaaatgcactattcgcaaaattacctgaaatgaataacaga
gcgatgattgatcaagttgccgtagaattcgcaatgtttaattcaaaagcagcaagaaaa
cgtgcagccaaatcaatagcatctgtgccaagaaatagatctgatgttttaccatattat
gctcgacttacagcaattttaagcaaacatatgcctgatattggtaaaggtgttgtcgat
ttattagatgatgaattccgctatctccaaaggaaaaagaatttagtcaaggagttggca
gaatcgagaacaaagaacgcaagattcatctctgagttgactaagtttgcagttgtacca
acacactacattcttcactgttacaaagtcctccttgatgatttcactggtgtaaatgta
gatgttctcgctatctttttagaaacttgcggtagatacctcttacggtcagaagaaaca
agtgaaaagatgaaaatattcttagatttaatgaaaagaaagcaacaacttcagcactta
gatcaaagacaacagttgttgcttgaaaatgcatactatcaatgcaacccacctgaaaga
gccgctagacctgaaaaatatagaagtccaattgaattatttattagacatctcatatac
gatgttctcgcaaggaagtccatcgataaggtatcaaaattattacgtaaactacattgg
gaagatcctgatgtgataagagtacttctgaacgtatttacaaaagtttggaagatcagg
tttagtagtatatcattattagcaattttggtttatgatttacaaagatttcatccagaa
ttttgcgttatggtagttgataaagtccttgatgatataaaaacaggcgttgagcaaaat
atattcaagtataaccaaaggagagtttcgagtataaagtatctaggtgaattatacaac
tatagaagtgttcatagtaatcaaatatttgatactttatggacgttggttacatttggt
catcctggaggcagaccattacctggcttattcactccgttagatgtgagcacagatttc
tttagagtacgtctagtctgtactttattagacacttgtggtacttgtttcgatcaaggt
aatcagaagaaacgactagattactttttgacattcttccaaatgtatgtcaccacgaag
gtttcgctaccaatggatatagactttatgtacacggatacgcttgaagctttgagaccg
aacatgaagatctcacgtacatttgaagaagccgttaccgcagtagatgaaatgatatcg
atggatagtgaaataaaccaagctgacgacatatatgagggtgtatatgatgatgatgaa
agtgataatgaggagaacggtataagagaaggtgctgcacctatagaacaagctgaagat
gaaattgaaggtgtagtagatggtgatgatcgagaagctgaagttgaagaagattcggac
tcggattcggaattggatgagaatgatcaaccagatgacgacaacgatcaagatgtcgta
ttacgcgagaaagaagcagctgaaataccagctgaagatgaagacgaatttaatagagaa
ctcgcgaagatggcaactgataattcagattcaaagaaagtcgacaagcgcgctttattt
gatctgagtttaccgatgataaagaaatcttcaatgacgcagcaagaatctgaagaaagg
gatccatcaaaaatgaaatttacagtcttgactaagaaaggtaccaagcagcagactaaa
acagttgatgtaccttccgaatcggcacttgctgttaactcgcgtacaaacgcactccaa
gatcaatacgagcaggctcaattaaagaaacttgtccttgactatgagaagcgtgatgcg
caacagcaagacgtagatgaacgtaaacgttgggataacctatctaaagcaacaggagtg
aagataaactttaaacaagaaacctaa
DBGET
integrated database retrieval system