KEGG   Weissella soli: WSWS_00073
Entry
WSWS_00073        CDS       T06066                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
wso  Weissella soli
Pathway
wso03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:wso00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WSWS_00073 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wso03021]
    WSWS_00073 (rpoC)
   03400 DNA repair and recombination proteins [BR:wso03400]
    WSWS_00073 (rpoC)
Enzymes [BR:wso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     WSWS_00073 (rpoC)
Transcription machinery [BR:wso03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     WSWS_00073 (rpoC)
DNA repair and recombination proteins [BR:wso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      WSWS_00073 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 mRNA_G-N7_MeTrfase
Other DBs
NCBI-ProteinID: AOT55726
UniProt: A0A288QKT7
LinkDB
Position
73172..76861
AA seq 1229 aa
MEYRNLWKGVKPLIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFD
ERIFGPTKDYECACGKYKRIRYKGIVCDRCGVEVTSSKVRRERMGHIELAAPVSHIWYFK
GIPSRMGLVLDMSPRSLEEVIYFASYVVTKSGDTPLQEKQLLSEREYRELKAQYGTAFEA
GMGAEAVQTLLANVDLEKEVEELKAQLREATGQKRVRSVRRLDIIEAFVVSGNKPEWMVL
DVIPIIPPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPGIIVQNEKRML
QEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGP
FLKMNQMGLPRPMALELFKPFLMRELIKRDLAANIRAAKRKIDDRDEDVMDVLEDVIKEH
PVLLNRAPTLHRLGIQAFEPVLVSGKAMRLHPLVTEAYNADFDGDQMAIHVPLSDEAQAE
ARLLMLAAGHILAPKDGTPIVAPSQDMVIGNYYLTTEEAGREGEGMIFKDINEARTAFQN
KYVHLHTRVGVQTSSFPDTKPFTPEQRNRIMVTTVGKLFFNDILPIGFPYLNEPTEANLH
GTDDKFFLEPGQDIREYLANNSIVAPFKKGYLSDIIAEVYKQYKVTETSLLLDRMKDLGY
DESTKSGLTVGVADVTDLGETKTMIVTEAHKQVAAVAKQFRRGLITDDERYARVIDIWNK
AKDDVTDELIKSFEPDNNIFMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPIIANF
REGLSVLEMFFSTHGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREIDCGTDRGLDVS
AIMNGNEVIESLYDRILGRYAQKAVIDPTTGEVIVAHNGMIDEDTAKRIIAAGITTVNIR
SAFTCNTEHGVCVFDYGRNLATGDIVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGG
ADITMGLPRVQEIFEARNPKGRAEISKVTGEVVSIEENPADRTKEVKIVGNGDEEVYTLP
INSRMKVAEGDHIHRGTEINDGSIDPKELIQVRDTLATENYIVRSVQQVYRLQGIEISDK
HIEVMARQMLRKVRVMDPGETDLLPGTLMDIAQFRDANKETLLNGGLPATARPVLLGITK
ASLETNSFLSAASFQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMTEYRQVKP
EVVADPVVVATEEGSKIPSIADIENSMNL
NT seq 3690 nt   +upstreamnt  +downstreamnt
ttggaatataggaacctatggaaaggggtcaaaccattgattgatgtcaataagtttgaa
agcatgcaaatcggtctagcatcgccagacaagattcgcagctggtcgtatggtgaagtt
aagaagcctgagacaatcaactaccgtacactcaagcccgaaaaagacggtttgtttgat
gaacgcatttttggtccaacaaaagactacgaatgtgcgtgtggtaagtacaagcgtatc
cgttataagggtatcgtttgtgaccgttgtggagtcgaagtaacttcatctaaggtacgc
cgtgagcgtatgggtcacatcgagttggccgctcccgtttcacatatctggtacttcaag
ggaatcccatcacgtatgggattggtcttggacatgtcaccacgttcattggaagaagtt
atctacttcgcatcatacgtggttactaagtcaggtgacacaccacttcaagaaaagcaa
ttattgtcagaacgtgaataccgtgagttgaaggcccaatatggtactgcctttgaagct
ggtatgggtgcagaagctgtccaaacgttgttggcaaatgttgaccttgaaaaggaagtt
gaagaacttaaagcacaattgcgcgaggccactggccaaaagcgtgtgcgttcagtacgt
cgtttggacatcattgaagccttcgttgtttctggtaacaaaccagaatggatggttttg
gatgttatcccaattattcctcctgatttgcgtcctatggtgcaattagaaggtggccgt
tttgcaacttcagatttgaacgacttgtaccgtcgagtaatcaaccgtaacaaccgtttg
aaacgtttgttagagttgaatgcacctggtatcatcgtgcaaaacgaaaagcgtatgttg
caagaagcggttgacgctttgattgataacggtcgtcgtggccgtccagttactggtcca
ggtaaccggccattgaagtcattgtcacacatgttgaagggtaagcaaggacgtttccgt
caaaacttgcttggtaagcgtgttgactattcaggtcgttcagttatcgacgttggtcca
ttcttgaagatgaaccaaatgggcttgccacgtccaatggctttggagttattcaagcca
ttcttgatgcgtgagttgatcaagcgtgatttggctgccaatatccgtgcggctaagcgt
aagatcgatgaccgtgacgaagatgttatggacgttttggaagacgttatcaaggagcac
ccagttcttttgaaccgtgcgccaacgttgcaccgtttgggaattcaagcgtttgagcct
gtcttggtttcaggtaaggcgatgcgtttgcacccactggttacagaagcctataacgcc
gatttcgacggtgaccaaatggccattcacgtgcctttgtcagatgaagctcaagccgaa
gcacgtttgctgatgcttgctgcaggtcacatcttggcacctaaggatggaacaccaatc
gttgccccttctcaagacatggttatcggtaactactacctaactactgaagaagccggc
cgtgaaggtgaaggcatgatctttaaggacatcaacgaagcgcggactgcgttccaaaac
aagtatgtgcacttgcacacacgtgtgggtgttcaaacatcatcattccctgatacaaag
ccattcacacctgaacaacgtaaccgcattatggtaacaacagttggtaagttgttcttt
aacgacatcttgccaatcgggttcccatacttgaatgaaccaactgaagctaatttacat
ggtactgacgacaagttcttcttggagcccggacaagacatccgcgagtatctagctaac
aatagcatcgtggcgccatttaagaagggttatctctcagatatcatcgctgaagtctac
aagcaatataaagttactgaaacgtcattgctattggaccggatgaaggacttgggatat
gacgaatcaactaagtcaggtttgaccgtcggtgttgccgacgtgactgacttgggtgag
acaaagacaatgattgtcaccgaagcacacaagcaagttgcagctgtcgcaaagcaattc
cgtcgtggattgattactgatgacgagcgttatgcccgtgttatcgacatctggaacaag
gctaaggatgatgtaactgacgaattgatcaagtcatttgaacctgacaataacatcttc
atgatgtctgactcaggggctcgtggtaacatctctaactttacccaacttgctggtatg
cgtggcttgatggctgcgcctaatggtaagatcatggaattgcctatcatcgctaacttc
cgtgaaggtttgtcagtgttggaaatgttcttctcaactcacggagctcgtaagggtatg
actgacacggccttgaagacggccgactcaggttacttgacgcgtcgtttggttgacgtt
gcgcaagacgttatcattcgtgagattgactgtggtactgatcgtggtttggatgtttcc
gcaatcatgaacggtaatgaagtgatcgaatcattgtacgaccgtatcttgggacgttat
gctcaaaaggcagttatcgacccaactactggtgaagttatcgttgcacacaacggcatg
atcgatgaagatacagcaaagcggatcatcgctgccggcattacaacggttaatattcgt
tcagcctttacttgtaatactgaacacggtgtctgtgtgtttgactatggtcgtaacttg
gccactggtgacatcgttgaagttggtgaagctgtcggaactgttgctgctcaatcaatc
ggtgaacctggtacacaattgacaatgcgtaacttccacacgggtggtgttgccggtggt
gctgacatcacgatgggtcttcctcgtgtccaggaaatctttgaagctcgtaaccctaag
ggacgtgctgaaatttctaaggtcacaggtgaagttgtttctatcgaagaaaacccagct
gatcgtactaaggaagttaagattgttggtaatggtgatgaagaagtttacacactacca
atcaattctcgtatgaaggttgctgaaggtgatcacattcaccgtggaactgaaattaac
gatggttctatcgatcctaaggaattgattcaagtgcgtgatactttggcaactgaaaac
tacattgtgcgttcagtacaacaagtttaccgtttacaaggtattgaaatttctgacaag
cacatcgaagttatggctcgtcaaatgttgcgtaaggttcgtgtcatggatccaggtgag
actgatttgttgcctggtactttgatggatatcgcgcaattccgtgacgccaataaggaa
actttgttgaacggtggtttgcctgcaacggcacgtccagttttgcttggtatcactaag
gcttcattggagacgaattcattcttgtcagccgcatccttccaagagacgacacgtgtc
ttgaccgatgctgcgatccgtggaaagaacgatccattggttggtttgaaggagaacgtt
attatcggtaagttgattcctgccggtactggtatgacggaataccgtcaagttaagcca
gaagttgtagctgaccctgtggtagttgcaactgaagaaggttcaaagatcccttcaatc
gctgatattgaaaactcaatgaacttgtaa

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