Weissella soli: WSWS_00122
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Entry
WSWS_00122 CDS
T06066
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wso
Weissella soli
Pathway
wso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WSWS_00122 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wso03021
]
WSWS_00122 (rpoA)
03400 DNA repair and recombination proteins [BR:
wso03400
]
WSWS_00122 (rpoA)
Enzymes [BR:
wso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WSWS_00122 (rpoA)
Transcription machinery [BR:
wso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WSWS_00122 (rpoA)
DNA repair and recombination proteins [BR:
wso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WSWS_00122 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AOT55775
UniProt:
A0A288Q5V3
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All DBs
Position
112498..113442
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AA seq
314 aa
AA seq
DB search
MLEFENPKITLVEEDSNYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAINSVQIDTVL
HEFSTIEGVVEDVTQIILNLKKVSMRIDSDEEKTLEINVTGPATVTAGDIAGDSDVEILN
KDLYIATVAAGATLHMTLSAVRGRGYVSGDQNKELHDEMPIGVLAIDSIFTPIERVNYQV
ENTRVGQRDDFDKLTLDIWTDGSLTPTEAISLGARILSDHLTQFVELSERAVTTQVMAEK
EEAEAPKHADSPIEELDLSVRSYNCLKRAGINSVQELTDRTESQMMAVRNLGRKSLDEIQ
EKLALLGLGFRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaattcgaaaacccaaagatcacactggttgaagaagatagtaattacggcaag
tttgtagttgagccacttgagcgcggttacggaactacgcttggtaactcactacgccgt
gtattgttgtcatcattgccaggtgctgctattaattctgttcaaattgatacagttttg
catgaattttcaacgatcgaaggtgttgttgaagacgtcacgcaaattattttgaaccta
aaaaaggtttcaatgcgcatcgacagtgatgaagagaaaacgctcgaaatcaatgtgact
ggtcctgctacggtaacggccggtgacattgctggagatagtgatgttgagatcttgaat
aaagatttgtacattgctacggttgcggctggggctacattgcacatgactttgtctgct
gtacgtggacgtggttatgtgtcaggtgaccagaataaggaattgcatgatgaaatgcca
attggcgttctagcaattgattcaatctttaccccaatcgagcgcgtcaactaccaagtt
gaaaacacgcgtgtcggacaacgtgacgactttgataagttgactttggacatctggact
gatggatcattgacgccaacggaagcaatttcattgggtgctcgtatcctttcagatcat
ttgactcaatttgttgaattgtcagagcgcgcggtaactacacaagtgatggcagagaag
gaagaagctgaggcacctaagcatgccgatagcccaattgaagaattggacttgtcagtt
cgttcttataattgtctcaaaagggccggaatcaactctgttcaagagttgacggatcgt
acagaatctcaaatgatggcggttcgcaacctcggtcggaaatcacttgacgaaatccaa
gaaaagcttgcgttgcttggattgggattccgcaaggaagattag
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