Weissella soli: WSWS_00301
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Entry
WSWS_00301 CDS
T06066
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wso
Weissella soli
Pathway
wso03420
Nucleotide excision repair
wso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WSWS_00301
03430 Mismatch repair
WSWS_00301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wso03400
]
WSWS_00301
Enzymes [BR:
wso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WSWS_00301
DNA repair and recombination proteins [BR:
wso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WSWS_00301
MMR (mismatch excision repair)
Other MMR factors
WSWS_00301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
UvrD_C
SLFN-g3_helicase
NACHT
AAA_16
DEAD
AAA_30
PRP8_domainIV
Motif
Other DBs
NCBI-ProteinID:
AOT55946
UniProt:
A0A288QLD6
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All DBs
Position
312880..315165
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AA seq
761 aa
AA seq
DB search
MSEPFDSEQARLDDVLAKIQDAKVLNDAKLKRAEKAQAEVHKGWDDVRFKSSTYSSLFET
AMSVRQQQQMLQERELATNSAEHQAVILDRLKERPYFARIDVQEKGAAVAEPIYIGLASF
SDSPDNFLVYDWRAPISSIYYDAGLGHVQYETPDGQQEAQVLLKRQFQIEEGKVVTIFDT
DEAVGDQMLLNAVSGESTTKMKSIVTTIQKEQNKIIRNTKAELLFVQGAAGSGKTSAVLQ
RVAYLLYRYRGHLTSGQVVMFSPNQLFNDYIDQVLPELGEQNMVQMTYYQYASRRLPKLK
LETLQERFEENLTDAEQAVVDFKGTSVYFKAMQRYAASLNQKNIKVRPIKFQGKEIIPVD
KITDIYYSFNENYKLGNRLQATKERLMRMLQSRVGSEMREQWVEDTVQSLSKEEYDTLLG
DNPREFASDEQEFNTLARLIVQQAMAPIAKGVNRNRFININAQFVHFLKSVPQLVDLSAH
HISAEQWQISVTATVNAMRHGELSLVDMTPFMLLYDLIKGSHGERDIRFVFIDEIQDYTP
FQLAFLKYSFPKARFTMLGDLNQAIFTKENAVSLQKELAALFDPELSEYIQLTQTYRSTQ
QITDFSKAVLINGAQIDAFDRVGEKPTMRVVADQAELVQATLTQLARNDAAKETTAIITK
TLAQAEEAYAQLREAAQVTIIRTENQRLVPGTIVVPAYLAKGLEFDAVIMWDASEETYHG
DNERQLVYTIASRAMHQLSIYGVGNITPLLDVDKSLYIEEK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccgtttgattcagaacaagcacgtttggatgatgtcctcgcgaagattcaa
gatgcgaaggtcctaaatgatgcaaaattaaagcgggctgaaaaagcccaggcagaggtg
cacaagggttgggatgacgtccgctttaagtcatcgacttattctagcctttttgaaacg
gcgatgtcggttcgtcaacaacaacaaatgttgcaagaacgggaattggccactaattca
gctgaacatcaggcggtgatcttggatcgtttgaaggagcggccatacttcgcgcggatc
gatgtgcaagaaaagggtgcggcggtcgctgaaccgatttatatcggtttggcttcattt
tcagattcaccagacaattttttggtctatgattggcgggccccgatttcttcaatctat
tatgatgctgggttaggtcatgtgcaatatgaaacacctgatggccaacaagaggcacaa
gtgttactaaaacgccaatttcaaattgaagagggtaaggtcgtcacgatttttgatacc
gatgaagcggttggtgatcaaatgttgttgaatgccgtttcaggtgaatcaacaaccaag
atgaagtcaattgtgacaacgatccaaaaagagcaaaataagattatccgtaacacgaag
gctgaattactcttcgttcaaggtgccgccggatcaggtaagacgtcggctgttttgcag
cgggtggcctacttgctttaccgttaccggggccacttgacttctgggcaggtagttatg
ttttcaccaaaccagttgtttaatgattatattgatcaagttttacctgaattaggtgaa
caaaacatggtgcagatgacatactatcagtatgccagtcggcgcttaccaaaattgaag
ctagaaaccttacaagagcgttttgaagagaatttaacggatgctgaacaagccgttgtt
gatttcaaaggtaccagtgtctactttaaggcgatgcaacgttacgcagcgtcattgaac
caaaagaatatcaaggtccgtcccatcaagttccaagggaaagagattatccctgttgat
aagatcacggatatctactattcatttaacgaaaactacaagttagggaaccgtctccag
gccacgaaagaacgtttgatgcggatgctccaaagtcgtgtcgggtctgaaatgagggaa
caatgggttgaagataccgtgcaatctttgtctaaagaagagtatgatactttgctaggt
gacaacccacgtgaatttgcttcggatgaacaagagtttaatacattggcacggttgatt
gtgcaacaagcgatggcaccaattgcaaagggtgttaaccgcaaccgtttcattaatatt
aatgcgcaatttgtgcatttcctcaagtccgtaccgcagttggtcgatttatcggcccac
catatttcagctgaacagtggcaaatatctgtaacggcaaccgtcaatgcaatgcgtcat
ggtgagttgtcattggttgatatgacaccgttcatgttgctttatgatttgatcaagggg
agtcatggtgaacgtgatattcgatttgttttcatcgatgaaattcaagactacacccca
ttccaattggcattcttgaaatatagctttcctaaggcgcgtttcacgatgttaggggac
ttaaatcaagcgatctttaccaaggaaaatgcagtttctttgcaaaaagaattagcggca
ttgtttgatccagaactatctgagtatattcaattaacacaaacctatcgctcaacccaa
caaattaccgacttctcaaaggcggtcctcattaatggggcacaaattgatgcgtttgat
cgggtcggtgaaaaaccaacgatgcgggtcgtcgcagatcaagctgagctagtgcaagcg
accttgacacaactggcacgcaacgatgcagccaaagagacgactgcgatcattaccaag
actttggcgcaagctgaggaagcctacgcgcaattacgtgaggcagctcaggtgacgatt
atccgcacggagaatcagcgtttggtaccaggtacaattgttgtccctgcttacctagcg
aagggcttggagtttgacgcggtgatcatgtgggatgcttctgaggaaacgtatcatggt
gataatgaacgtcagttagtgtacacgattgcatcacgggcgatgcatcaactatcaatt
tacggagttggtaatattacgccgttacttgatgttgataagtcactatatattgaagaa
aagtaa
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