Weissella soli: WSWS_00493
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Entry
WSWS_00493 CDS
T06066
Symbol
deaD
Name
(GenBank) RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wso
Weissella soli
Brite
KEGG Orthology (KO) [BR:
wso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wso03019
]
WSWS_00493 (deaD)
03009 Ribosome biogenesis [BR:
wso03009
]
WSWS_00493 (deaD)
Enzymes [BR:
wso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WSWS_00493 (deaD)
Messenger RNA biogenesis [BR:
wso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WSWS_00493 (deaD)
Ribosome biogenesis [BR:
wso03009
]
Prokaryotic type
rRNA helicases
WSWS_00493 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF4232
PHD_like
Motif
Other DBs
NCBI-ProteinID:
AOT56130
UniProt:
A0A288Q8M9
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All DBs
Position
516102..517460
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AA seq
452 aa
AA seq
DB search
MAKFTDYNLRPELYKALAEIRFTTPTAVQEKLIPVVLQGRSVVGESQTGSGKTHTFLIPI
FEKLDLKNHKVQAVITTPSRELASQIHIAAKQLASGFAEEDQPHIGYYIGGTDKARQISQ
LENSQPQIVIGTPSRINDLYRSGALDVHTATQMVVDEADMTLDGGFLPDVDAIAGALPAD
LQMMVFSATIPQKLQPFLRKYMNNPVIEEIPTETVIANTITNLLVSTKGKTKDEMIYQLL
TMGTPYMALVFTNTKTRAKELAHFLRVQGLKVAEIHGDIQPRERKRTMAAVQHLDFQYVV
ATDLAARGIDIPGVDLIINDGIPSELEFFVHRVGRTGRNGQSGTAITIYDPDEEDRVAAV
EGMGVEFIPKNFSKGELKDGIDRRRRRQRTKSTVKLDPTMIGLVMKKKKNIKPGYKRQIK
SAIARDAKYKKRVEEREELRSKRKAKKNSSGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaatttactgactataatctacgtccagaactatataaagcgttggcggagatt
cgttttaccaccccaacagccgttcaagaaaaattaattccagtggtcttacaaggacgc
tcagtcgtcggcgaatcacaaactggatctggaaagacccatacgtttttaattccaatt
tttgagaagttggatcttaaaaatcacaaggtccaagctgtgattaccaccccttcccgt
gaattagcttcacaaattcatatcgctgctaagcaattggcgagtgggtttgctgaggaa
gatcaaccccatattggttactatattggtggcactgataaagcacgtcaaatcagtcag
ctcgaaaatagccaaccccagatcgtgattggcacgcctagtcgtatcaatgacttatac
cgttcaggtgctttggatgtccacacagccacacaaatggttgtggatgaagctgatatg
acacttgatggtgggttcttgccagatgtcgacgccattgccggtgccttgcctgcagat
ctacaaatgatggtcttttcagcaactatcccgcagaaattacaaccattcttacgtaag
tatatgaataatccagtgatcgaagaaattcccacggagacggtgattgccaataccatt
acgaatcttttggtaagtactaagggtaagacaaaagatgagatgatttatcaactcttg
accatgggaacaccctatatggccttagtgttcactaacactaagactcgtgccaaggaa
ctggcccatttcttgcgcgtacaagggctcaaagtcgccgaaattcatggtgatattcaa
ccccgtgaacgtaagcggacgatggctgccgtccaacaccttgattttcagtatgtcgtt
gccactgacttagctgcccgtggtattgatattccaggggttgatttgatcattaatgat
ggcattccttctgaactagagttcttcgtgcaccgtgtcggccgtactggtcgaaacgga
caatcgggaaccgcgatcaccatttacgatcctgatgaggaagaccgcgtcgctgcggtt
gaaggcatgggggtagaatttattccaaagaacttctccaaaggggagttgaaggatggt
atcgaccggcgccgtcgtcgtcaacgtactaaatctacggtgaaacttgatccaaccatg
attggtttggtgatgaaaaagaagaagaacatcaaaccaggttacaagcgtcagattaag
agtgcgattgcccgcgatgccaagtacaaaaagcgggttgaagagcgtgaagagttacgc
tcaaagcgtaaggcaaaaaagaattctagcggaaaataa
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