Weissella soli: WSWS_00607
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Entry
WSWS_00607 CDS
T06066
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wso
Weissella soli
Pathway
wso03030
DNA replication
wso03430
Mismatch repair
wso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WSWS_00607 (dnaE)
03430 Mismatch repair
WSWS_00607 (dnaE)
03440 Homologous recombination
WSWS_00607 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wso03032
]
WSWS_00607 (dnaE)
03400 DNA repair and recombination proteins [BR:
wso03400
]
WSWS_00607 (dnaE)
Enzymes [BR:
wso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WSWS_00607 (dnaE)
DNA replication proteins [BR:
wso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WSWS_00607 (dnaE)
DNA repair and recombination proteins [BR:
wso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WSWS_00607 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOT56244
UniProt:
A0A288Q8B1
LinkDB
All DBs
Position
634412..637789
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AA seq
1125 aa
AA seq
DB search
MVPLNTKSAFTLLQSPLMPNQLVKQAAEYHYEAVGLADQDVLYGLADFYTAAVQTQIKPI
LGLTVQVAGLETSIADSFAVTLFVENQTGYHHLIEISSLVKTNRQVLTWQDLAPFLSGLF
VVLPAESELTTLSMTAEAERVQGFMQKLATMVELQQVFLGVELFTNRGQVAQLQQLSTQF
GLRLVAFDQVAYGHAEDGFVQHVLQKIASGETIPNLGLAQSTPAAAYLRPIDQWVQAYEQ
IGLHEAVTNTDWIAAHSTFEMTKTAVTLPAYQTPQHQSAHDYLAALAQQGLKARLQGLQV
DQAVYEQRLAEELQIIDQLGFNDYFLIVWDVIDFAHRNKIRTGPGRGSAAGSLVAYTLWI
TDVDPIAYDLLFERFLNPERAQMPDIDIDIPDNRREDILQYLHQKYGHERVAQIITFSTL
AMKAAIRDVARVFGLTPAQIDTLSKSIPNARDITTLAKAYEASQTFRNALVDAPVDGQLL
FKTAQRIEGLPRNHSLHAAGVVLSANPLTETIPVQLGDDGRLVTQLTKNPVEALGLLKID
FLALSNLNILDIAIREIEKETHAPFNIAKVDLNDPATMQLFQRAQTNGIFQFESSGMKNM
LRQLQPDHFEDLVAANALFRPGPMQFISNFIARKHGREPIEVPDESIAELVAPTYGIIVY
QEQVMRMAQQFAGFTLGEADLLRRAMSKKDLAKIEATKADFVRGAIALGHDEATAIKVFS
YVEPFAQYGFNRSHAVAYSKLAVQMAYLKTHYPLAFFKAVLNDAISDSKKVREYIAEAKA
AGVGLLGPNINESWQGYSIHHNQLQMGLASIKGMRRDFREAIIATRQSNGAFKDLPDFIN
RLENKFRKVELFEPLVWSGAFDVFTTNRQALYNSLQGFIDAAGLAGESMALFNTLAPKIR
DIEDYAPSERLNLERETLGVYLSGHPIEQYVQAIDGQYHQDISTLVVGQKGAKILLYVEN
VKVIRTKKGEQMAFVDGMDMTGNLSITVFARQFQKYSHLLQPENILAIYGNVEQQRGRDD
LTLIAEQIVEAQTLVQPGTAVATDLPPATGQWFLRIPAAAQNPQVAAQFNRLFQQLHGSN
PVLLVYEADDRKVALTHENYLAAGPEVEADFKAILGQNNVVFRKN
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgctaaatacaaaatcagcttttaccttgttacagagcccattgatgcccaat
caattggttaagcaagcggctgaatatcactatgaagctgtcggtctagctgatcaagat
gtcttgtatgggttagctgatttttatacggccgctgtgcaaacacaaattaaaccaatt
ctcgggttgacagtacaagtggcaggtcttgaaaccagtattgctgatagttttgcggtg
acactatttgttgaaaatcagaccggctaccatcatttaattgaaatttcgagcctagtc
aaaacgaaccgccaagtgcttacttggcaggacctagcgccctttttgtctgggttattc
gtggtcttacctgccgaaagcgagttgacgacgctcagtatgaccgcggaagctgaacgg
gtgcaaggatttatgcaaaaattagccaccatggttgaactgcaacaagtctttcttggg
gttgaactattcacaaatcgcggccaagtagcccaactacagcaactgagcacgcaattt
ggattacgtcttgtcgcctttgatcaggttgcctacgggcatgctgaggatggctttgtc
caacatgttttgcaaaaaattgcgagtggcgagaccatcccaaaccttggtctggcgcaa
agtacgccggcagccgcctatttgcgtcctatcgatcagtgggtacaagcatatgagcaa
attggcttgcatgaggcggtcactaatactgattggatagctgcccatagcacctttgaa
atgactaagacagcagtgactttacccgcctaccaaaccccacagcaccaaagtgcgcat
gattatctggctgcattagcccagcaaggcctcaaagctcgtctgcagggattgcaggtt
gatcaggctgtttatgagcagcgtttagctgaggaattgcaaattatcgatcaactcggc
tttaacgattattttttgattgtgtgggatgtcattgattttgcccaccgtaacaagatt
cgaacgggaccaggacgtggctcagcggcgggctcattggttgcgtatacactttggatt
accgatgttgacccgatcgcctatgacttgctatttgagcgctttttgaatcctgaacgc
gcccaaatgccggatattgatattgatattccagacaatcgccgtgaagatattttgcaa
tacttacatcaaaaatatggccatgaacgggtcgcacaaatcattacgttttcgacgtta
gccatgaaagcggccattcgagacgttgcgcgcgtctttggcttaacgccagcgcaaatt
gatacgctctctaaatcaattcccaatgcccgtgatattacgaccttagccaaagcatat
gaggcttcgcaaacgtttcgcaacgcgctagtggatgccccagtcgatggtcagctgttg
tttaagaccgcccaacgtatcgaaggactaccccgtaatcattcattgcatgcagctggg
gtggtcttgtcagccaatccgttgactgagacgattccggtacagctaggggatgacggt
cgcttagtgactcagttaaccaaaaatccggtcgaagcactcggtttgttaaaaattgat
ttcttggcattgtcgaacttaaatatcttagatatcgccatcagagaaatcgagaaagag
acccatgcgccctttaacatcgcaaaagtggatctaaatgatccggccacgatgcaactc
ttccaaagagcccagacgaatggtatttttcaatttgaatcttcagggatgaagaacatg
ttgcggcaattacaaccggatcattttgaggatttggtggcagccaatgccctatttcga
ccaggtccaatgcaatttattagtaatttcatcgcacgaaaacatgggcgcgaacccatc
gaagtgccagatgaaagcattgctgagttagttgcaccaacctacggtattattgtctat
caagagcaagtcatgcggatggcccaacaatttgctggctttacattaggtgaagctgat
ttattgcggcgtgcgatgtcgaaaaaagatttggccaagattgaggcaactaaggccgac
ttcgtgcggggggcgatcgcactcggacatgacgaagctacggcaatcaaagtctttagc
tatgtggagccttttgctcaatatggctttaatcgatcacacgcggtggcctattcaaag
ttagccgtgcaaatggcttatttgaaaacgcattatccgctcgctttttttaaggccgtc
ttgaatgatgcaattagtgatagtaagaaagtccgtgagtatatcgcggaggccaaagcc
gctggtgttggtcttttaggaccaaatatcaatgagagttggcaagggtattcaattcat
cataatcaactacaaatgggcttagcttccatcaaggggatgcgccgggatttccgagag
gctattattgccacgcggcaaagtaatggtgccttcaaagatttgccggactttatcaac
cggttagagaataagtttcgtaaggtagaactgtttgaaccgttagtatggtcaggtgct
tttgatgtctttacgactaatcggcaggcgttatacaattcattgcaggggtttatcgat
gctgctggtctagctggtgaatcaatggccctgtttaacaccctggcccctaaaattcgt
gatattgaggactatgcccccagtgaacggttgaatcttgagcgtgaaacccttggtgtg
tatctaagtgggcaccccattgaacaatatgttcaggcgattgatgggcaatatcatcaa
gatattagcactttagtggtgggacaaaagggcgctaagattttgttatatgtggaaaat
gtcaaggtcatacgtaccaaaaagggtgaacagatggcctttgtggacggaatggatatg
acaggcaatctttcgatcaccgtgtttgcgcgtcaatttcaaaagtatagtcacttattg
caacctgaaaacattttggccatttatgggaatgtcgagcaacaacgtggccgtgatgac
ttgacactgattgccgaacaaattgttgaggcacaaaccttagtgcagcctggtacggcg
gtggccacggatttaccgccggcaaccggccaatggtttttacgtattccagccgccgcg
caaaatcctcaggtagctgcgcaatttaatcgtctgtttcaacagttacatggtagtaat
ccggtgctattagtgtacgaagccgatgatcgcaaagtcgctttgacccacgaaaattat
ttggcagctggaccagaggttgaagccgatttcaaagctattttagggcaaaataatgtt
gtatttcggaaaaactag
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