KEGG   Weissella soli: WSWS_00792
Entry
WSWS_00792        CDS       T06066                                 
Name
(GenBank) Ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
wso  Weissella soli
Pathway
wso03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wso00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WSWS_00792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wso03019]
    WSWS_00792
Messenger RNA biogenesis [BR:wso03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WSWS_00792
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 P8
Other DBs
NCBI-ProteinID: AOT56428
UniProt: A0A288QTP2
LinkDB
Position
complement(835594..837465)
AA seq 623 aa
MSNTTLSVMPFGGLRENGKNMYAVTVDEDIFILDAGLKYPESDLLGVDVVIPDFQYLVEH
QDKVAGIFLTHGHADAIGALPYLLSEMSVPVFGSEITIELAKLAIEAEPLTKDFNDYHIV
RGDQEVEFGDVTVSFFETTHTIPESLGIVIGTPEGQIVYTGDFKFDTTASPYYRTDLLRL
AEIGRKGVKALLIDAAGTANIGQSAHESEIATYIYDGMHHHKGRIIVAAVASNIQRIQQV
IDASYKVGRKIVLSGNDLEKVVRTALRLKKLSLPVPENELFVSLKNMAKLTPEETVILET
GKMGEPIRHLQRMAHGDDRSIQIQKGDLVFITTTPSTAMEGIVARTRDSLFRAGADVKQI
STDLKSSGHASKNDFQFMLNLLKPENVIPVQGEYRVLNAAAHAAKEVGYTEAHTFILKNG
DNLQLTAEPVLTGSIQVGSTMIDGSGVGDIGSIVLNDRRILSEDGVLIAVVTIDRKKKKV
VAAPKIDSRGFVYVKTSRDLMHEAGELVQNTVADGIKNTKEFDWGNLKNSVRDVLGKYLY
EQTRRKPVILPVIMEANQNGRRRKKPKSAHADNQPNQGNAPTPAVNVNQPAQTGDGEAKK
KRRPRRRKPKNPATVAPVATQEN
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgagtaacacgacattaagcgtaatgccgttcggtggtttgcgtgaaaacgggaaaaac
atgtatgccgtaacggttgatgaagatatttttattttagatgctgggttaaagtaccca
gaaagtgatttgttgggtgtggacgtagtcattcctgacttccaatacttagttgaacac
caagataaggtggccggcatctttttgacgcatggtcatgcggatgccattggggccttg
ccatacttattgtcagagatgtctgtccctgtttttggttcagaaatcaccattgaattg
gcaaaattggccattgaagcagaacctttgacgaaggactttaatgattaccacattgtg
cgtggtgatcaagaagtggaatttggagatgttaccgtctcattctttgaaacgacccat
acgatcccagagtctttggggattgttattgggacaccagaggggcaaattgtttatact
ggtgacttcaagtttgataccacagcgtcaccatactaccggactgatttattgcgctta
gctgaaattggacgtaagggtgtgaaggccttgttgattgatgcggctgggacggctaac
attggtcagtctgcgcatgaatccgaaattgcgacgtacatttatgatggcatgcatcat
cataagggacgcatcattgtggctgcagtggcttcaaacatccaacgtatccaacaagtc
attgacgccagttataaggttgggcgtaaaatcgtcctttctgggaatgatctagaaaag
gttgtgcgcacggcgctacgcttgaagaagttgagcctgccggtaccagaaaatgaactc
tttgtttcattgaagaacatggccaagttgacacctgaagaaacggtcatcctagaaact
ggtaagatgggggaacccatccgccacttacaacggatggcccatggtgatgaccggagc
attcaaatccaaaagggtgatttggtctttattacaacgaccccatcaacagcgatggag
ggaattgtggcccgtacgcgtgactcacttttccgtgctggggctgatgtgaagcaaatc
tcaactgatttgaagtcttcagggcatgcctcgaagaacgatttccaatttatgttaaac
ttgctcaagccggaaaatgtcattccagtgcagggggagtaccgggtcttaaacgccgcg
gctcatgcagctaaggaagtgggttacaccgaggcacataccttcatccttaagaatggt
gacaacttgcaattgacagccgagcctgtcttgactggttcaatccaagttggttcaacg
atgattgacggttctggcgtgggtgatattggttcaatcgtcttgaacgatcgccgcatt
ttgtcagaagatggcgtgttaatcgccgttgttaccattgatcgtaaaaagaaaaaggtg
gtggccgcaccaaagattgattcacgtggctttgtttacgtgaagacttcgcgggatttg
atgcatgaagcgggtgaattagtgcaaaatacggttgctgatggcatcaagaataccaag
gaatttgattggggtaacttaaaaaattctgtccgtgatgttttaggtaagtacttgtac
gaacaaacacgtcgtaagcccgtgattttgccggttattatggaggcaaaccaaaacggt
cgtcgtcgtaagaagcctaagtcagcccatgctgataatcaaccaaatcaagggaacgca
ccaacgcctgcggttaatgtgaaccaaccagcccaaacgggtgatggggaagcgaagaag
aagcgccgtcctcgtcgtcgtaagcctaaaaacccggcgacagttgcaccggtagcaaca
caagaaaactaa

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