KEGG   Weissella soli: WSWS_00994
Entry
WSWS_00994        CDS       T06066                                 
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
wso  Weissella soli
Pathway
wso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:wso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    WSWS_00994 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wso03400]
    WSWS_00994 (recD)
Enzymes [BR:wso01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     WSWS_00994 (recD)
DNA repair and recombination proteins [BR:wso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     WSWS_00994 (recD)
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_RecD2 OB_YrrC UvrD_C_2 SH3_13 AAA_11 Viral_helicase1 AAA_22 AAA_5 UvrD-helicase nSTAND3 SLFN-g3_helicase AAA AAA_28 NTPase_1 AAA_17 AAA_16 RsgA_GTPase CbiC HHH_5 NPHP3_N AAA_7 TsaE AAA_29 AAA_18
Other DBs
NCBI-ProteinID: AOT56625
UniProt: A0A288Q6Y7
LinkDB
Position
complement(1029701..1032229)
AA seq 842 aa
MNDEIDLFGDSSAKAHETPTMEAQVQNIVFAANDNFYKVLAVKIDKQNFEYDEKEITVTG
SFGDVQIGSSYEFQGVLKNHPKFGEQFQATNYKRLAASTNSGVVKYLASDKFEGVGEKTA
EKIVAELGVDAIDIILNRPDVLGDIGLKPAQQTTIIEQLKASDGMERAIVALNDYGFGAS
IAAAIYAKYGLETLHVLQDNPYQLVLDIEGVSFARIDRLAAQREMDPLDERRIKAGVVAA
INAATFEKGDTYLLVDELLGEAQQLLQRTRNIVVDMALIKTAVLALTKENVIVAEGERIF
VYTIYAAEVEIAQNMLALNQSAGLFKREAAAKALAEVEAANPFEYDPLQKDAMLAALTNK
LFILTGGPGTGKTTIINGVVEAYEKLLVNDGTKADDLDKMINLAAPTGRAAKRLSESTGK
QASTIHRLLGINGREAISNAEPTTLEGQLLIIDEMSMVDTELFATVVRSAPKNMQIILVG
DKDQLPSVGPGRVFYDLLASGMLNFRELETIHRQGKGSTIIELASAVKEGTVPADLLERK
PDRSFFPVHMAQVAPYIEKVVKSWIARGKSVRDMQILAPMYRTAAGVNRLNLLGQSLFNP
LKPGAREIKWREGEFEFGFRVGDKVMQKTNDPENNVFNGDIGYIKTIMLAKDKENAEKAD
YMEVEFDAGMVCYMRPDFINITLAYATTIHKAQGGEYALVIMPLVMQFGRMLQRNLLYTG
LTRASESLVLLGEPAAFAKAIETEGGDRRTTLQQRLAEAIDGVMPKIPTQIKRDQLNHAA
ETVAETLKHATAKPAATKTAAPEMAVADADPDTLTIASIMEGRFDPNIGMGDLTPYDFLE
KA
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgaatgatgaaattgacttgttcggtgattcttccgccaaggcgcacgagacaccaaca
atggaggcgcaagtacagaacatcgtctttgcggcaaatgataatttttataaagtgtta
gcggtgaaaatcgataaacaaaactttgagtatgatgaaaaagaaattacggtgaccggt
agttttggggatgtccagatcggctcgagttatgagtttcaaggggtccttaaaaaccac
cctaagtttggtgagcagtttcaagcaactaattacaagcggttagcagctagcacgaat
tcgggggtcgtcaaatatttggcgagtgacaagttcgaaggggttggcgaaaaaacagct
gaaaaaattgtcgctgaattaggcgttgacgcgatcgacatcattttaaatcgaccagac
gtgttaggtgacattggtttgaaaccggcccaacaaacaacgattatcgaacaacttaaa
gcttcagatggcatggaacgggcaatcgtcgcgttgaacgactatggctttggtgcctca
attgcggcggccatctatgcaaaatatgggttagagaccttacatgtattgcaagacaat
ccataccaactcgttttagatattgaaggggtgtcatttgccagaatagatcggttagcc
gcgcaacgtgaaatggatccgttggatgagcgtcgcattaaagccggggtcgtggcggcg
attaacgcagctacctttgaaaagggtgatacctatctgctcgtcgatgagttattaggc
gaggcgcaacaactcttgcaacgtacgcgaaatattgttgtggatatggcgttaattaaa
acggcagtcctggcgctcaccaaagaaaacgtgattgttgcagaaggcgaacgcatcttt
gtctacacaatttatgcggccgaggtcgaaattgcacaaaatatgttagcgttaaatcaa
agtgcagggctgtttaaacgggaagccgccgctaaggccctagcagaagtggaggccgcc
aacccctttgaatatgatcctttgcaaaaagatgcgatgttggctgctttgaccaataag
ctatttatcttgacgggcgggcctggtaccggaaaaacaaccatcatcaatggtgttgtt
gaagcgtatgaaaagcttttggtaaatgatggcaccaaggcagatgacctcgataagatg
attaatctggcggcaccaactgggcgggcagctaagcgtttatcagaatcaactggtaaa
caagctagtaccattcaccgtttgttaggcatcaatgggcgtgaagcaattagtaatgct
gaacctacgaccttagaagggcaattattgattattgacgagatgtcgatggttgacacg
gaactctttgcgacggtggtaagatcagcacccaaaaatatgcaaattattttagtaggt
gataaggatcaattaccatcagtgggacccggtcgtgtgttctatgatttgctcgcctcg
gggatgttgaattttcgggaattggaaacgattcatcgccaaggtaaaggttcaactatt
attgaattggctagtgctgtgaaagaaggtacggtgcccgctgatttgttggagcgcaag
cctgaccgatcatttttcccagttcatatggcacaagtcgcaccatatatcgaaaaggtg
gttaaaagttggattgcgcgcggtaagagcgtccgggacatgcaaattttggctcccatg
tatcggacagcagcgggcgtcaatcgtttaaatctactcggacagagtttatttaatcca
ctgaaaccaggtgcccgtgagatcaaatggcgcgaaggtgagtttgaatttggcttccgc
gttggtgacaaggtgatgcaaaaaacgaatgatcctgaaaataacgtgtttaatggtgat
atcggctatatcaaaacgatcatgcttgccaaagataaagaaaacgccgaaaaagctgac
tatatggaagttgagttcgatgcaggtatggtgtgttacatgcgccccgatttcattaat
atcacgctcgcctatgcaacaactattcataaggcacagggtggtgaatatgccttagtg
attatgccactcgtgatgcaatttggtcggatgctacaacgaaacttgctctataccgga
ttaacgcgtgccagcgaatcgctcgtactgttgggtgaaccagcggcctttgcaaaggcc
attgaaacagaggggggggaccgccggacgaccctacaacaacgtttagcagaggcgatt
gacggtgtcatgccaaagataccgacgcaaattaagcgtgaccaattgaatcatgcggcc
gagacggttgctgaaacgctcaagcatgccacggctaagccggctgcaacaaaaacggct
gcaccggagatggccgtcgctgatgcggatccagacacgttgacaattgccagtatcatg
gaaggacgctttgatcccaatatcggtatgggtgacttgacgccgtacgacttcttagaa
aaggcttga

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