Weissella soli: WSWS_01097
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Entry
WSWS_01097 CDS
T06066
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
wso
Weissella soli
Brite
KEGG Orthology (KO) [BR:
wso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wso03400
]
WSWS_01097
DNA repair and recombination proteins [BR:
wso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WSWS_01097
Archaeal homologous recombinant proteins
WSWS_01097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AOT56726
UniProt:
A0A288QNG1
LinkDB
All DBs
Position
complement(1133197..1136376)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPLKIKMQNFGPYADETIDFTKFTESQLFLISGQTGAGKTTMFDAMTYALFGDVIDRKG
TEMRSEFATPDDATAVTFWFEHHGKYYRVKRQPTYLRRSVRSKDPTKLVDAKATVEMAEV
AADLTHETKALGTKKNIVDRLITELLHLTAEQFRQIIILPQGEFRKFLSAPSDVKADTLR
SLFGTEIFDTFTQQLKESNSAQAKAIEKLTDQVEGQFTNLSWPTDTVEPVAGVLSERLAQ
AQQVKVAEQSRLAGLQKEAEVAEQQQTEAAQAYSMAVTLSAQFDRHQELAVREASLLADE
PRFAQQRQRQQWLHEALSYQPQVVSYQSLQKEAEELTIRLADLVAERTQVLQEVAAQAKR
QDQLTNTQTKVTDARERRRQILEELKPLAVRVTDLEGQIDKTEHQLQTDTSQLASVQTDF
GTQETQVQSLRDQLDQLADLKEVERQQHDLDLQYTGLEAQQATIMQTEQEQQTQRAKLNE
LQARAERLTTQNETAQAAAQEAKRQRARIMIAMLQADLVVGEPCAICGEIFTGQHNDVHL
QNLDQADLHQQMDAVDAAEQWAQEALTALTQVHTEMTGVQQALDKLAVTIGESQQALADA
YADFLVTAAAFATTMTWPAAFEAAQVTANVMTLRDLLKANQTRYEALTAAKATAQSQLNQ
TTAAIAQIEQRLTTGRVSREEQQHQLAQLTAGQTVLSMTAYDEEVQQLNGVISTFEEAQT
ALAKAQQKTAIAIERIETQLKLAQQQQAEVAMQITAHEEDFTGLFTKFSVTNLTDFIELL
QQPGLADEANDLQREITTYEANVQAVHEQLTQLNAQLADQSRPDLEALRKVQTDAEMRYK
QSHERYMIIRTTVTNFAHQVDAIATQIRAIEQKNAAGKALNELVVVMTGRGRIKLNLERY
VLRQFMLEVLHYANANYINTLSNGRYQFTLDDTQHGVQNQNGLEINVIDYAAGGVQRSTT
TLSGGESFMAALAIALSLAEVVQNRAGGAKIEALFIDEGFGSLDSGTLEQAIEALRSVEA
GGRLVGVISHVDAMKREIQQQLLVKKHGDGHSSIAYSLV
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccattaaaaattaaaatgcaaaatttcgggccctatgctgatgagaccattgat
ttcacaaaattcacggagtcacaattatttttgatatcgggtcaaactggtgccggtaaa
acgacgatgtttgatgctatgacgtatgcgttatttggggatgtcatcgatcgtaaaggc
actgagatgcgctcagagtttgccacccctgatgacgcgactgcggtaactttttggttt
gagcatcatggtaaatattatcgggtcaaacggcaaccaacctatttacggcgtagtgtg
cgtagtaaagatcccacaaaattagtcgacgccaaagcgaccgttgagatggcggaagtt
gctgctgatttgacccatgaaacgaaagcgcttggcacgaagaaaaatatcgttgatcgc
ctaattacggaattattgcatttaacggcggaacaatttcggcaaattattattctgcca
caaggtgaatttcgtaaatttctgagtgctcccagtgatgtcaaagcggataccttgcgt
tcgttatttggtaccgaaatttttgatacctttacacagcaattgaaggaatctaatagt
gcccaggcaaaagcgattgaaaagctgacggatcaggttgagggccaatttacaaattta
tcatggccaacggacactgttgaaccggtagctggtgtgctatctgaacgcttggcccag
gcccaacaagtcaaggtcgccgaacagtctagattggcaggactgcaaaaagaggccgag
gtcgctgagcaacagcagacggaggcagcccaggcgtatagcatggctgtgactttatca
gcgcagtttgatcggcatcaagaactggccgtgcgtgaggcgagcttgttagccgacgaa
ccgcggtttgcgcaacaacgacagcgacaacaatggttacatgaggctttgagttatcag
ccacaagtggtgtcttatcaaagcttgcaaaaagaggccgaggaactgacaataaggcta
gctgacttggtcgctgaacggacccaggttttacaagaagtggcggcccaagcaaaacgg
caggaccagttgacaaacacccaaactaaagtgactgacgcgcgcgaacgtcggcgtcag
atattagaagagttgaaacccttagcagtccgagtgactgatttggagggtcaaatcgat
aagacagagcaccaactccagactgacaccagccaattagcaagtgttcagacggatttt
ggcactcaagaaacgcaggtccagtccttacgagatcaacttgaccaattggccgatttg
aaggaagttgaacgtcagcaacacgatttagatttgcagtataccgggttagaagcccaa
caagcaacgattatgcaaactgaacaggagcaacagacgcaacgcgctaaattaaatgag
ttgcaggcgcgggctgaacgattaacaacgcaaaatgagactgcgcaggcagcggctcaa
gaagccaagcggcaacgggcacggattatgattgccatgttgcaggcagatttagttgtt
ggtgagccttgcgctatctgtggtgaaatttttactggccaacacaatgatgttcatctc
caaaacctggatcaagctgacttgcatcagcaaatggatgcagttgatgcagcagaacaa
tgggcgcaagaggcgttgaccgctctcacacaggtgcataccgagatgacaggcgtgcag
caagcactagataaattagctgtcacgataggtgagtcgcaacaagcactggccgacgcg
tatgctgattttttggtgactgcagctgcatttgccacgacgatgacctggccagctgca
tttgaagcagcccaggtgaccgcgaatgtgatgacattacgagatctgttgaaagccaac
caaacccgctatgaggcgctcaccgctgccaaggcgactgctcagtcacaactaaatcag
acgaccgccgccattgcacaaatagaacagcggttaaccaccgggcgagtcagccgcgag
gagcaacaacaccagttagcccagttgacggccgggcaaacagtgttatcgatgaccgcc
tacgatgaagaagtacagcaattaaatggcgtgattagcacctttgaagaagcacaaacc
gcattggccaaggcacaacaaaaaaccgccattgcgattgaacgcattgagacccagttg
aaattagcacaacagcagcaagctgaggtggccatgcagataacagcccatgaagaggac
tttacggggttgtttaccaaattttcagtcaccaacttgactgacttcatcgagctttta
caacaaccaggattagcggatgaagcaaatgatcttcagcgcgagatcacaacctatgaa
gctaatgtgcaagctgtccatgagcagttgacccagctcaacgcgcaattggcggatcaa
tcgcggcctgatttagaagcactacgcaaagttcagacagatgctgaaatgcggtataag
caaagccatgaacggtacatgataatccgaacgaccgtcaccaattttgcgcaccaagtg
gacgccattgcgacacaaatcagggcgattgaacaaaaaaatgcggccgggaaagcccta
aatgaattggtggtcgtgatgaccggtcgtggtcggattaagcttaatttggaacggtat
gtcttacgccagtttatgcttgaagtattacactatgctaacgccaattatattaatacg
ctgtcaaatgggcgttatcaatttaccttggatgacacccaacatggtgtgcaaaatcaa
aatggcttggaaattaacgtcatcgattatgcagctggtggggtgcagcgctcaacgacg
accctttcaggcggagaatcctttatggcagcgttggcgattgcgctatcgctggctgaa
gtggtgcaaaatcgcgcgggtggtgccaaaattgaggcattattcatcgatgaagggttt
ggttcattagatagtgggactttggaacaggcgattgaggcgttgcgttcggtcgaagcg
ggtgggcgtctcgttggcgtcatttcgcacgttgatgccatgaaacgtgaaattcaacaa
caattgctggtgaaaaaacatggcgatggtcatagttcaattgcctattctttggtttag
DBGET
integrated database retrieval system
