Weissella soli: WSWS_01270
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Entry
WSWS_01270 CDS
T06066
Name
(GenBank) Ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
wso
Weissella soli
Pathway
wso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WSWS_01270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wso03019
]
WSWS_01270
Messenger RNA biogenesis [BR:
wso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WSWS_01270
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GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AOT56878
UniProt:
A0A288QUT9
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Position
complement(1296886..1298448)
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AA seq
520 aa
AA seq
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MNIAMVILLSLVAIVIVFVVGYTVAKIKINNALQLANKTAQDITDQAVIDAEQLKKTALV
EARDESQRYQDRLERDLAERRSEVKTQEERLVSRESVLDRKDESLQKREDVIVEKEKKLD
QQRQSVHDKEHRADELVTAREAKLVEVAELSREDAREKILRETRESLVKERAVMIKESEE
QAAAEADKRAKNLVVQAIQRSAADMVAETTVSTVTLPNDDMKGRIIGREGRNIRAIETVT
GIDLIIDDTPEAVVLSGFDPVRREIAKNALEKLIADGRIHPARIEEMVDKARKEMDEHIR
EVGEQTVFDLGLHNIHPDLVKTIGRMNYRTSYGQNVLVHSIEVAKLTGMLAAELGQDVTL
AKRAGLLHDIGKAIDHEVDGSHVELGVELTTKYHEKPVVINAIASHHGDVEPESIIAVLV
AAADSISAARPGARSESLENYVQRLQQLEGIANAFNGVEKSFAIQAGREIRVMVEPAAVS
DLESQVLAHDIKEQIEHDLDYPGHIKVTVIRESRSIEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgcaatggtcatcctgttgtcgcttgtcgcaatcgtaattgtatttgtggtt
ggatataccgttgctaagattaagattaacaacgcgttgcaactagcaaataaaacagca
caagatatcacggatcaagcggttatcgatgccgaacagttgaaaaaaactgctctggtt
gaggcccgtgatgaaagccaacgatatcaagatcgtctcgaacgtgatttggctgaacgt
cgtagtgaagtcaagacacaagaagagcgcttggtaagccgtgaatctgtactggatcgt
aaagatgaatctttgcaaaagcgtgaagacgtgattgtggagaaagaaaagaaacttgat
caacaacgacaaagtgtccacgataaggaacaccgggctgatgaattagtaaccgcgcgt
gaagcaaagttagtagaagtcgccgagttatctcgtgaagatgcgcgtgagaaaatcttg
cgtgaaacgcgggagtctcttgtcaaggaacgtgctgtcatgatcaaggagagcgaagag
caagcggctgctgaagcagacaagcgcgccaagaatttggttgtgcaagctattcagcgt
tcggctgccgatatggtcgctgaaacgactgtatcgactgtaacattaccaaatgacgac
atgaagggtcgcatcattggtcgtgagggtcgtaatatccgggctatcgaaacggtgacg
gggattgatctgatcatcgatgatactcccgaagcggtcgtattgagtggatttgatccg
gttcgtcgtgaaattgcgaagaatgccttggagaagttgattgcagatggtcgtatccac
ccagctcgtattgaagagatggtggataaggctcgcaaggagatggacgagcatattcgt
gaagtcggtgaacaaacggtcttcgacttgggattgcataatatccatcccgatttggtt
aagacgattggacgcatgaattaccgtactagttatggtcaaaatgtgttagttcactca
attgaggttgcaaaactaactggcatgttggctgccgagttaggtcaagatgttacgctt
gccaagcgcgcaggattattacacgatattggaaaggccatcgaccatgaagttgatggc
tcacacgtggaacttggcgttgaattgacgaccaagtatcatgagaagccagttgtcatt
aacgcaattgcttctcaccacggggatgtcgaacctgagtcaattatcgctgtcttggtc
gcagcggctgattcaatttcagctgcccgacctggtgctcgttcagaatcacttgaaaat
tacgttcaacgactacaacaacttgaaggtattgcaaatgccttcaatggtgttgaaaag
tcgtttgcgatccaagctggtcgtgagattcgagtgatggtggaaccagccgcggtgtct
gatttggagagtcaagttttggctcacgacatcaaagaacaaattgaacatgatttggat
taccctggtcatattaaggtcacggttatccgggaatcacgctcaattgaatacgctaaa
taa
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