Wolinella succinogenes: WS0066
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Entry
WS0066 CDS
T00146
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wsu
Wolinella succinogenes
Pathway
wsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS0066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wsu03019
]
WS0066
Messenger RNA biogenesis [BR:
wsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WS0066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
MupG_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CAE09235
UniProt:
Q7MSV9
LinkDB
All DBs
Position
66700..68745
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AA seq
681 aa
AA seq
DB search
MEEKNRSSNPEREEPREPREPRREEGAGAPAEPRKEGQEQRSRPRRRGGRNRSRTPRPDQ
PNGERPSGENPQPEGQEGNGERRDRGERNHSQNQGANAGFYKDLKRGVEVNDRIQKSRLN
PHHKLDLQTKAKVRITPLGGLGEIGGNITVIETENSAIVVDVGMSFPDDEMHGVDILVPD
FSYLEAIKHKIAGVVITHAHEDHIGAVPYLYKQMQFPLYGTPLPLGMIGSKFDEHGLKRF
RSLFRVVEKRKPIKIGDFEVEWIHMTHSIIDASSLAIKTEAGTIIHTGDFKIDHTPIDGF
AADLHRLAHYGEEGVMLMLSDSTNSHRPGHTESEATVGPTFDKLFMSAEGRVIMSTFSSN
IHRVYQAIQHGIKYGRKVAVIGRSMEKNLEISRELGYISIPQNVFIDAHEVAKYADKEVL
IVTTGSQGETMSALYRMATDEHRHIKIKPTDTIILSAKAIPGNEASVSSVLNFLLKAGAK
VAYQDFSEIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHLVKHKDTAMRCGIPEKNIL
LMEDGDQIEVAPTYIRKVRSVKTGKVFIDNQINKQIDNDVVLDRQKLATDGIVSIIAQVS
PAQQKVIDKPRVTSFGIVGDRESRAFAKEMEEVLEHFLKNCKKEFLQSSRAAENEIRQVV
RKHIFRKTKKYPMIVPTIFFV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagaacagatcaagtaatcctgagcgagaggagcctagggagcctagggaa
ccccgaagagaagagggagcgggagctcctgcagagcctcgcaaggaggggcaggagcag
agaagtcgcccccgaagacgaggagggcgcaatcgctctaggacacctagacccgatcag
cccaatggtgaacggcccagtggcgaaaatcctcagccagaggggcaagaggggaatggg
gagcgccgcgataggggcgagaggaatcattcccaaaatcaaggggctaacgcggggttt
tataaagacttaaagcgtggcgtggaggtgaatgaccgcatccagaagagccgtcttaat
ccccatcataagcttgatttgcaaaccaaagccaaagtgagaatcactcctcttggaggc
ttgggagagattggcgggaatatcaccgtcattgagaccgaaaatagtgctatcgttgtg
gatgtgggcatgagcttccctgatgatgagatgcatggcgttgatattttggtgcctgat
tttagctatcttgaggcaatcaagcataaaatcgcaggagtggtgatcactcacgcccac
gaggatcacatcggagcggtgccctatctttataagcagatgcaatttcccctttatgga
accccgctgcctttggggatgatcggaagtaaatttgatgagcatggacttaagcgattc
cgttcacttttccgtgtggtggagaagcgtaaaccgatcaaaatcggcgattttgaggtg
gagtggattcatatgacacactccatcattgatgcctcttctttggcgatcaaaaccgag
gcgggaaccatcattcatacgggagattttaagatcgatcacactcctattgatggcttt
gcggctgatttgcatcgtctggctcactatggcgaagagggagtgatgctaatgctaagc
gattcgacgaactctcatcgccctgggcataccgaaagcgaagcgaccgtaggacccact
tttgataagctctttatgtcggctgaggggcgagtgatcatgtccaccttctcttctaac
atacaccgcgtctatcaggcgattcagcatggaatcaaatatggtcgtaaagtggcggtg
atcggtcgctccatggagaaaaaccttgaaatctccagagaactaggctatatctctatt
cctcaaaatgtctttattgatgcacacgaagtggctaaatacgcggacaaagaggtgctt
attgtgaccacaggaagtcaaggggagaccatgagcgctctctatcgtatggcaaccgat
gagcatcgccatatcaagattaagcccacggatacgatcattctctcagccaaggcgatt
ccagggaatgaagcctccgtctcttcggtgctcaacttcctccttaaggcgggcgctaaa
gttgcctaccaagattttagcgagatccatgtgagcggacacgccgctcaagaggagcaa
aagttgatgctaagattggtcaagcccaaattcttcttgcctgtgcacggagagtataac
cacctcgtcaaacataaagacacggcaatgagatgtggaatcccagagaagaatattttg
ctcatggaggatggggatcaaatcgaagtggccccaacctacattcgcaaagtccgtagc
gtgaagacgggcaaagtctttatcgacaatcaaatcaataagcagattgacaatgatgtc
gtgttggatcgtcaaaagcttgccaccgatggtatcgtctccatcatcgcccaagtctcc
cccgcgcagcaaaaggtgattgacaagccgagggtgactagctttggaattgtgggtgat
cgcgagtctcgagcttttgccaaagagatggaagaggtgctagagcatttccttaaaaac
tgtaaaaaagagtttttgcaaagctcacgagccgcggaaaatgagattcgtcaagtggta
cgaaagcatattttccgaaaaaccaaaaaataccccatgattgtgcccactatctttttc
gtgtaa
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