Wolinella succinogenes: WS0225
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Entry
WS0225 CDS
T00146
Symbol
RECJ
Name
(GenBank) PUTATIVE SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE EC 3.1.
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wsu
Wolinella succinogenes
Pathway
wsu03410
Base excision repair
wsu03430
Mismatch repair
wsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WS0225 (RECJ)
03430 Mismatch repair
WS0225 (RECJ)
03440 Homologous recombination
WS0225 (RECJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wsu03400
]
WS0225 (RECJ)
DNA repair and recombination proteins [BR:
wsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WS0225 (RECJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WS0225 (RECJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WS0225 (RECJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
bVLRF1
Motif
Other DBs
NCBI-ProteinID:
CAE09383
UniProt:
Q7MAI2
LinkDB
All DBs
Position
223356..224960
Genome browser
AA seq
534 aa
AA seq
DB search
MTGIAKPPLLGKREIESILSQRFAKDRFCRLKDLPSPEKLHGIPQACDLIIEAMQQKRRI
VVIGDYDVDGIVSTAIMVDFFHRLSYPITSVIPNRFCDGYGLSPALIERLETDLIITVDN
GIMAHEAAKICQERGISLIITDHHTPPLELPCAKVIINPKLSCCSFPQKEICGASVAWYL
CAALKGRLEAKIDMGEFLDLLALAIIADVMPLVEVNRLLVRQGLKEMARSNRAAFVVLKE
KLRKSHFSGEDVAFLIAPLLNSAGRMEDASLSLEFLLSDSILEAGEKFDRLCALNCLRKE
TESRLFEEALGQIDLCGEALLAYGEDWHEGVLGIVASRLTDRYKKPAFILTQKEGSLKGS
ARSVGELDLVRLLQKSHHLLLRYGGHKGAAGIQLRRENFESFKQAIEEELSRLKERIEWR
CEGEECLGEIALESVDAELLDILERFEPYGEGNPKPRFFCKEARVCRYKIVGAEKNHTSL
VLKNPSGNERKAIAFRQVYEFAPLASISCLFSLSRDIFSAESIPQLIIERLEIL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgggatagctaaacctcccctccttggcaagcgggagattgaatcgatcctctcc
cagaggtttgccaaggatcgcttctgccgtctcaaagacctcccctctcctgagaagctt
catggaatccctcaagcctgcgatctgatcatcgaggcgatgcagcaaaagagacgaatt
gtggtgattggcgattatgatgtcgatggaatcgtctccacggctattatggttgatttt
ttccatcgcctctcctaccccatcacctctgttattcccaatcgattttgtgatggttat
ggactctctcccgcgctcatagagcgattagagacggatcttatcatcacggtggataat
ggaatcatggcccatgaagcggcaaaaatctgccaagagaggggaatctctctcatcatc
accgaccaccacactccccctttagagcttccatgcgcgaaggtgattattaaccccaag
ctctcttgttgctcttttccacaaaaggagatttgcggggcaagcgtggcttggtatctc
tgcgccgcgcttaaggggaggcttgaggccaagattgatatgggagagttccttgatctt
ttggcgctggcgatcattgccgatgtgatgcctttagtggaggtcaatcgtcttttggtg
cgccaaggcctcaaggagatggcgcgatcgaatcgagccgcttttgtggtgctcaaagag
aagttgcgcaaaagccattttagtggagaggatgtagcctttttgattgctcctcttctc
aatagcgcaggcaggatggaggatgcgagcctctctttagagtttttactgagcgattcg
attctagaggctggggagaagtttgatcgcctctgcgcgctcaactgcctgcgcaaagag
accgaatcaagactctttgaagaggcactggggcagattgacctttgtggtgaggcgctt
ttggcctatggcgaggattggcatgaaggagtccttggaatcgtcgcctccagactcaca
gatcgctacaagaaacccgcctttatcttgacgcaaaaagagggaagcctcaaaggaagt
gctcgaagtgtaggagagcttgatttggtgcgtcttttgcagaagagccatcatcttctt
ttgcgctatggggggcacaagggtgcggcgggaatccagcttcgacgagagaacttcgag
agctttaagcaggcgattgaagaggagctttcaagactcaaagagcgaattgagtggaga
tgtgaaggggaagagtgcttgggagagattgctcttgagagcgtggatgcggagctcttg
gatattttggagcgatttgagccctatggagaggggaatcctaaacctcgattcttttgc
aaggaggcgagggtgtgtcgctacaaaatcgtaggggcagagaagaatcacacctccttg
gtgctcaagaatccctctggcaatgagcgcaaggcgattgcttttcgtcaagtctatgag
ttcgcgccccttgcttcgatctcttgccttttttctctctctagggatattttcagcgcc
gaatcgattcctcagctcatcattgaacgcctcgaaatcctttag
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