Wolinella succinogenes: WS0876
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Entry
WS0876 CDS
T00146
Name
(GenBank) ATP-DEPENDENT DNA HELICASE EC 3.6.1.
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wsu
Wolinella succinogenes
Pathway
wsu03420
Nucleotide excision repair
wsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WS0876
03430 Mismatch repair
WS0876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wsu03400
]
WS0876
Enzymes [BR:
wsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WS0876
DNA repair and recombination proteins [BR:
wsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WS0876
MMR (mismatch excision repair)
Other MMR factors
WS0876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
ADDB_N
CarD_TRCF_RID
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAE09984
UniProt:
Q7M9J2
LinkDB
All DBs
Position
832544..834589
Genome browser
AA seq
681 aa
AA seq
DB search
MNRHFLDDLNAAQREAATQIEGSLLILAGAGSGKTKTITTRLAYLIEEVGIPPSNTLTLT
FTNKAAAEMRERALRLVQRRDMHPPLLCTFHKFGLLFLKFHIQRLGRKPNFVLIDGDDRK
KILKNINDDLPVGLVESEISRMKNWLIMPDEALLSAQDKNYKLIASIYGKYEEFLKEKNM
VDFDDLLLLSLKILEGDEELAKEVSEKYQYIMVDEYQDTNELQYKLLKKLCQTHNNLCVV
GDDDQSIYGWRGANINHILDFPDHFAGAKVVRLEENYRSTAPILEAANSLIEFNKGRLGK
TLKSVKGAGEAIEILESLDEGEEAQKVAKRIRTLLDSGVSPSDIAVLFRLNALSRSLEEG
FNRAKIPFKLVGAMRFYERSEIKDILSYFRLIVNPHDDFSLARIINKPKRGIGKVTQDKL
LLEAQRAGCSLFELYKKGAIEGLVSAKNHETLTGFFAMIEELQAVLEESTLRFLERFEEL
SLLKEYFENSKETIDRVSNIEEFYGVFRDFILSNPMANLEDFLNDLSLKSDQDEVGDSFV
SCMSVHASKGLEFEHLFVVGFEEGFFPMIREGSDLEEERRLGYVAFTRAKSHLAVSHVHS
RFYKGKRTELLKSRFLKEAGLLEGSLVIEKRSNFKKGDLVTHKIFGAGRVSEVSGVGKEY
KLKINFGGMVREILSSYVIKI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacactttttagatgacctaaacgccgcccaaagggaggccgcaacccaaata
gaggggtctttgctcattttagcaggtgcggggagcggcaagacaaagacgatcactaca
cggcttgcctatctgattgaagaggtgggaatccctccctccaacacgctcacgctcacc
ttcaccaacaaagccgctgccgagatgcgagagcgtgcactgcgacttgtgcaaaggcgt
gatatgcaccctccgctcttgtgcacttttcacaaattcgggcttctattcttgaaattt
cacattcagcgcttgggacgaaaacccaattttgttctcattgatggtgacgatcgcaag
aagattctcaaaaatatcaacgatgatttacccgtgggcttagtcgagagcgagatttca
cgcatgaaaaactggctcatcatgcctgatgaggcgctccttagcgcgcaagataaaaac
tataaactcatcgcctcaatctatggaaaatatgaggagtttttaaaagagaaaaacatg
gtcgattttgacgacctcctcctgctttcattgaagattctagaaggggatgaggagctc
gccaaagaggtgagcgaaaagtatcaatacatcatggtggatgagtatcaagacaccaat
gagctccaatacaagctcctcaaaaagctttgccagacgcacaataacctctgcgttgtg
ggagatgatgatcaaagtatctatggctggaggggagccaatatcaatcatattctcgat
tttcctgatcattttgcgggcgcaaaggtggtgaggctggaggagaattatcgctccacg
gcccctatcttggaggcggccaatagcctcattgaattcaacaaggggcgtctaggaaag
acgctaaaaagtgtcaaaggggcaggcgaggcaatcgaaattttggaatcgttagatgag
ggcgaggaggcgcaaaaggttgccaaaagaatccgcacgcttcttgatagcggagtctcg
cccagcgatatagcggtgctttttcggctcaatgctcttagccgttccctcgaagagggt
ttcaatcgcgccaagattcctttcaaactggtgggggcgatgcgattttatgagcgaagt
gaaatcaaagacatcttgagctactttcgcctcatcgtcaatcctcatgatgatttctct
ttggctcgaatcatcaacaagcccaagcgagggattggcaaggtgacgcaagataaactc
ctccttgaggcgcagagagctggatgttcgctctttgagctctataaaaaaggggcgatt
gaggggcttgtgagcgctaaaaaccatgagacactcacaggattcttcgcgatgatcgag
gagcttcaggcagtcttagaggaatcgactctgcgatttttggagcgctttgaagagctc
tctctgctcaaagagtattttgaaaacagcaaagagacaatcgatagagtttcaaacatt
gaagagttttatggagtgtttcgcgacttcattctctccaatcccatggcgaatctcgaa
gactttttgaacgacctctcgctaaagagcgaccaagatgaggtgggggatagttttgtc
tcttgcatgagcgttcatgcgagcaagggattggagtttgagcatctttttgtggtggga
tttgaggagggttttttccctatgattcgcgaggggagtgatctggaggaggagcgacgg
cttgggtatgtggcgttcactagggctaagagtcacctagcggtgagccatgttcattcg
cgattctataagggcaagcgcacggagcttttgaagtctcgattccttaaagaggcgggt
ttgcttgaggggagcttggtgatagagaagcggagcaacttcaaaaaaggagatttggtc
acacacaaaatctttggtgcaggtcgtgtgagtgaggtgagcggcgtaggcaaggagtat
aagcttaagatcaattttggggggatggtgcgcgaaatcctctcctcctatgtcattaag
atctag
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