Wolinella succinogenes: WS0878
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Entry
WS0878 CDS
T00146
Symbol
truB
Name
(GenBank) TRNA PSEUDOURIDINE SYNTHASE B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
wsu
Wolinella succinogenes
Brite
KEGG Orthology (KO) [BR:
wsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wsu03016
]
WS0878 (truB)
Enzymes [BR:
wsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WS0878 (truB)
Transfer RNA biogenesis [BR:
wsu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WS0878 (truB)
Prokaryotic type
WS0878 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
CAE09986
UniProt:
Q7M9J1
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All DBs
Position
835052..835927
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AA seq
291 aa
AA seq
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MEANKGKFYHETGGESLKPNALFVGYKPMFMSSNHYLQRLKRRFGVKKAGYSGTLDPFAK
GVLVVAFGHYTRLFDHLNQEPKVYRATLWLGLHSDSLDIENILGVEVIPPYSKERVEEIM
GALEGEISYTPPKYCAKRIGGRRAYDMARNKEEVELPILTMRVGRLSLLHYTHPFVHFEA
EVSKGSYIRSLGGMIASRLGCYGALSSLERLSEGEMRFEGYRELEPLEILPYPKIDATSL
KEEFLHGKKLLASDLGNPKEGKYIAEFEEFFSIIEIKEGQVVYLLNRMEKC
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcaaataaagggaaattttatcatgaaacaggaggagaatctttgaagcctaac
gccctttttgtcggttacaaaccgatgttcatgagctctaaccactatctccagcgcctc
aagcggcgctttggggtcaaaaaagcgggatatagcgggacgcttgatccttttgccaaa
ggggttctagtcgtggcatttgggcactatacgagactatttgatcatctcaatcaagag
cctaaggtttatagggcgaccttgtggctggggcttcatagcgattctttggacattgag
aatatcttgggggtggaggtgattcctccctattccaaagagagagtggaagagataatg
ggtgctttggagggggaaatcagctacactcctcccaaatattgcgccaagagaattggc
ggcaggagggcgtatgatatggcgcgcaacaaagaagaggtggagcttccaatcctcacg
atgagggtgggcagactctcgctgctccactacacgcatccttttgtccattttgaggcg
gaggtgagcaaaggctcttatatccgaagccttggggggatgatcgcctctagacttgga
tgttatggtgcactctctagtctagagcgtctaagtgaaggggagatgcgctttgagggc
tacagagagctagagccgctagagattctcccctatccaaaaattgatgccacctcttta
aaggaggagtttcttcatgggaagaagcttttagcaagcgatcttggaaatcctaaagag
ggcaagtatatagcggaatttgaggaatttttctctataattgaaatcaaagagggacag
gtcgtctatttgctcaataggatggaaaaatgctga
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