Wolinella succinogenes: WS2062
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Entry
WS2062 CDS
T00146
Name
(GenBank) PENICILLIN-BINDING PROTEIN
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
wsu
Wolinella succinogenes
Pathway
wsu00550
Peptidoglycan biosynthesis
wsu01100
Metabolic pathways
wsu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
wsu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WS2062
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WS2062
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
wsu01011
]
WS2062
Enzymes [BR:
wsu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
WS2062
Peptidoglycan biosynthesis and degradation proteins [BR:
wsu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
WS2062
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
CAE11062
UniProt:
Q7M7V4
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All DBs
Position
complement(1956703..1958538)
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AA seq
611 aa
AA seq
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MSGRLKFFLIFFVSVWVILVVRIYFISIKSNTYYEELAKRNMIKTEFIVPIRGQILDRNG
EPLAVNELGFSLALPPRMSLRSKLAELEHQVELLAEFFPSLNKEETINHYKRQDSPYNHD
FINVVDFISYEEMHRLYPRLLQSDYIKILPSTKRFYPNKTTASHIIGYTGRADTKDIERT
PLSKFTGIVGKSGLERQYNDFLQGELGYRKIKVTAFNQEIELLEEKRPAENNDILLTLDL
RLQKAMDEEFAEKNGAAVVMNIHTGEVLAAGSYPEYDINDFVGGISYTKWNALREDPHNP
LLNKLINGTYPPGSVIKMGIGMALLEYAGINEHTVIETPEYIEFGGRKFRDWRVGGHGSS
DLVKSIKRSVDVYYYKLSQRAGMSNIAKVIEQMGFGRPTGIDLPNEFSGIVPSPEWKMKR
FKQPWYIGDTIVSSIGQGSFAVTPLQVARHTALLASGKLPTPHLAKSLGDIPKIYEPQEA
LSSFQKSKLPPIRLGMYQVCSEEGGTAYWHTRASKVSIACKTGTAQVVGISQTDKKRIRE
EDMDYFHRSHAWITGYFPYENPQYAVTVMVEHGGHGGSASGGILVKMANTLSDLGYIDTS
IEKGAKGNVKR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggtcgtctgaaatttttcctgattttttttgtttcggtttgggtgattcttgtg
gtgcgaatctacttcattagtatcaaatccaacacctactatgaagagcttgccaagcga
aacatgataaaaaccgagtttatcgtgcctattcgcggacagattctagatcgaaacggc
gaacctctggcggtgaatgagctggggttctcgcttgcgcttccgcctcgcatgagtctt
cgctctaagctagccgagttagagcatcaagtagagcttttggcagagtttttcccttcg
ctcaacaaagaggagacgatcaatcactacaagcgccaagattccccctacaatcatgac
ttcatcaatgtggtggactttatctcctatgaggagatgcaccgcctctatcctcggctt
ttgcagagcgactatatcaagattcttcccagcaccaagcgattctatcccaataaaact
actgcctctcacattattggctacacaggaagggcggatacgaaagacatcgagcgcact
ccactatccaaattcacaggaatcgtgggcaaaagtggattggagcgccagtataatgac
tttttgcaaggagagcttggctatcgcaagatcaaagtgaccgccttcaaccaagagatc
gaactgcttgaagagaagcgtcccgccgaaaataatgacatccttttgacgctcgattta
agacttcaaaaggcgatggatgaagagtttgctgagaaaaatggcgcagcggtggtgatg
aatatccacacgggcgaggtcttggcggcaggaagttaccccgaatatgatatcaacgac
tttgtagggggaatctcttacaccaagtggaacgctctgcgcgaagatcctcacaacccc
cttcttaataagctcatcaacggcacctatcccccaggctcggtcattaagatggggatt
ggcatggcgctccttgaatacgctggaatcaatgaacacaccgtgattgagacgcccgaa
tatattgaatttggagggcgaaagtttcgagattggagggttggagggcatggaagctct
gacttggtcaaatcgatcaaacggagtgtggatgtctattattacaagctgagccaaagg
gcaggcatgagtaatatcgccaaggtgattgaacagatgggctttggtcgtcccacgggg
atcgatctgcccaacgagttctcaggcattgtccctagtcctgagtggaagatgaagcgc
ttcaagcagccttggtatatcggagacaccatcgtctcctccatcggccaaggctctttt
gccgttactcctcttcaggtggcacgacacacggcgcttctagcgagtgggaaattgccc
accccgcatcttgccaagagtttaggtgatattccaaagatctatgagccccaagaggca
ctctcctcttttcaaaaaagcaaacttccccctatccgtctagggatgtatcaggtgtgc
agcgaagagggggggacggcctattggcacacacgagcatccaaagtgtctatcgcttgc
aaaacaggaacggctcaggtggtggggatctcccagacggacaaaaagcgaatcagggaa
gaggatatggactactttcatcgctcccatgcctggatcacgggttattttccctatgaa
aatcctcagtacgccgttacggtgatggtggagcacggggggcatggagggagcgctagt
ggaggaatcttggtcaaaatggcgaatactttatcggatctagggtatattgatacgagc
atagagaagggagctaaaggcaatgttaaacggtaa
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