Wolinella succinogenes: WS2100
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Entry
WS2100 CDS
T00146
Symbol
RPON
Name
(GenBank) RNA POLYMERASE SIGMA-54 FACTOR
KO
K03092
RNA polymerase sigma-54 factor
Organism
wsu
Wolinella succinogenes
Pathway
wsu02020
Two-component system
wsu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
wsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WS2100 (RPON)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WS2100 (RPON)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wsu03021
]
WS2100 (RPON)
Transcription machinery [BR:
wsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WS2100 (RPON)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Mad3_BUB1_I
Motif
Other DBs
NCBI-ProteinID:
CAE11098
UniProt:
Q7M7T2
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All DBs
Position
1987984..1989246
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AA seq
420 aa
AA seq
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MKLRQSLQNKTKLSATLKSWLPILQSGLSDLEETLGEFTSENPYIEVQSKIETNLSSKIP
KKSLERAPKNSLSEKIEALTIQEDSLYDILYEQIAPPLFPTATSQKIALKIIENLNEEGY
FEGEIEKIALECESSSESCEKIRQRFSRLEPPGIGAKDVRESFLFQLDSSECDDELFSLV
RELIEELEYHTRYKNHPRYVEAMRLIRSFKNPPAIDFFEKEPDIIPDLFVHDSSGQIEVR
LNDAYYPTIVLDTARADKKHEYVKAKIKEAKDLIDALDMRKATLYKIGLMILEYQYDFFM
GGEIRPMKLKDLAEEFNHAPSTISRAIASKYLECNRGIFSLKSFFSTAIDEETSNAAIKD
YIADMVKNEERGKPLSDIKILQNVENKFGIKMVRRTITKYRKQLNIASSSERKKLYEISV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaggcaatcgctccagaacaaaaccaagctctccgccacgcttaaaagctgg
cttcccatcctgcaaagcggtctatcagacctagaggagacgctaggagagttcacgagc
gagaacccttacattgaggtgcaatccaaaatagagaccaacctctcctccaaaatcccc
aaaaaaagcctagagcgagcacccaaaaactctctctctgaaaaaatcgaagccctcacc
atccaagaggattccctctatgatatcctctacgaacagatcgccccacccctctttccc
accgccacctcgcaaaaaattgctctcaagattattgagaatctaaacgaagagggctat
tttgagggcgaaatagaaaaaatcgccctagagtgcgaaagttctagcgagagttgtgag
aagattcgccagcgcttctctcgccttgaacctccgggaatcggggctaaagatgtgagg
gaatcgtttctttttcagcttgattcttcggagtgcgatgatgagctcttctccttggtg
cgcgagctgattgaggagctagaataccacactcgctacaagaatcacccccgctacgtc
gaagcgatgcgccttattagaagcttcaaaaatcctcccgccatcgacttttttgaaaaa
gagcctgatatcattcctgatctttttgttcacgattcttctggacagattgaagtgcga
ctcaatgacgcctactatcccactatcgttctagacacagcgcgcgcggacaaaaaacat
gagtatgtcaaagccaaaatcaaagaggccaaagacctcatcgacgccttggatatgcgc
aaagcgaccctctataagattgggctcatgattttagagtatcagtacgacttcttcatg
ggaggagagattcgccccatgaagctcaaagaccttgccgaagagttcaaccacgccccc
tccaccatctcacgcgccatcgcctccaaatacctagagtgtaatcggggaatcttctcg
cttaagagcttcttctccacagcgattgacgaggagacctccaatgccgcgatcaaggac
tacatcgcggatatggtcaaaaacgaggagaggggcaagcccttaagcgacatcaagatt
ctgcaaaatgtggagaacaaatttggaatcaaaatggtgcgacgcaccatcactaaatat
cgaaaacagctcaatatcgccagctctagcgaaaggaaaaagctctatgaaatcagcgtc
taa
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