Weissella tructae W-1: KHQ32_00275
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Entry
KHQ32_00275 CDS
T08629
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
wtr
Weissella tructae W-1
Brite
KEGG Orthology (KO) [BR:
wtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wtr03400
]
KHQ32_00275
Enzymes [BR:
wtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ32_00275
DNA repair and recombination proteins [BR:
wtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KHQ32_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QVV91389
LinkDB
All DBs
Position
49597..53130
Genome browser
AA seq
1177 aa
AA seq
DB search
MLNLKFGPASADHEYALLEDMKQLLEADSEAQLFYIVPNHIKFESEINVLTRLSEMMGHQ
GRALAVPRVQVFSLSRLAWYYMQDDALYQQANVSSDGLAMLVQRLLRGAKDELALYGNML
SKPGFISQFSDQLLEIKQANLSWDEVAELSVDEQTPETLQRKMHDLSLIGQRLDAFLKDQ
GRYLSADLLQALKVFLRTDKVDLSKHHFFINRYSQMTNGEAGVVEALIAEAGNVTIALPS
DAGSASLREAQTDENDLFYKPKMLGRRFQGVAQDGGIETSVVNIEAQRDMSATMKAVEKF
WITYEQEGVPQEKAHVVANELEVWKANTAYQEIEQMARQIRQEVAMGNARYRDYLLMARD
LNPYTNMIPAIFNRMGIPFFMDADKQMNTHPLVAFIKQLLGLERFTTRTLMQLLKNELLV
PTDVDIQDYREALAITENYVLAKNIQGWQWESETPWQYDWKVSNVEDEATQAQLTLRNRQ
LALIHDQVSQIIVPFLQALKDAPDTQTMVRALYVFLTEQGVSARLLGWRDEAIQQGDLFR
GQQPEQVWQTLMNLLDDFVDIFGNEHMSVPDLRETLVAGFDSATYTGIPATMDQVRITES
GIVQGQNYQTAIIFGATAQQLPATTRTKAILNDGDRELLLPLLPESAKLRDTADKQMAEE
SLLMYNAMMSPTQRLIWSYPTSDGDSSLSGSTYIVRLNAHFVNMAETTFVPLPDPTSENI
GQFVGSPATTLAHVIRMEQIAHLNKLPISTAWQSLRQQVSQIKPEMTMHLMQSLNYHNQV
AQLSSGLVDALFGRDLKMSVSRLQTFARNPYEFFLSYGLRLQERQVLQLTPADKGTLIHA
GFEQFFMSLIQENLVLGELTDTEITQRVTKTMETILAGEEQELEIFKSSPQMAYLTTQLV
QQVAATVLKMKRGQPTNHRVQTQAVETTFGLGAQGLAPVKYDLNQGSLTLRGKIDRMDEM
QAGDQRFVTVVDYKSSERDFKLNKVIAGLELQLMTYWAAIAQNTTTPVGGALYWNAQVPW
VKASDLDSNLAWSEMVSASTEVNATNGSYAGVLTRDESYLETLDPQEGQPSLYGFKRTSK
GAISKTGDNTYTDDELAVLTQFNEYQVRRIGDEILTGHFDLQPFKDGNTSTGLANSAYKP
VMMFDAALGNQYKDISMFPTKRQDALTWMQEEMEEEE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttgaaattcggtccagcaagtgctgatcatgaatatgctttgttagaagac
atgaagcagctcctagaggctgattcagaagcacaattattctatattgtgccaaaccat
attaagtttgaaagcgaaattaacgtgctgacacgtctatctgaaatgatgggacatcaa
ggacgtgctttagctgttccacgtgtacaagtattctcgctaagtcggttggcttggtat
tacatgcaagatgatgctttgtaccaacaagcgaatgtatcaagtgatggattagcgatg
ttggtacaacgtttattgcgtggggcaaaagatgagttagcgttatacggtaatatgttg
tctaagcctggattcatcagccaattttcggatcaattactagaaattaaacaagcgaat
ttgagttgggatgaagtggcagaattaagtgttgatgaacaaacacctgaaactctgcaa
cgtaagatgcacgatttaagtctaattggccaacgcctagatgcttttctaaaagatcaa
gggcgttatttaagtgcggacttactacaagcgttgaaagtgtttttacgtacagataaa
gttgatttatcaaaacatcatttctttattaatcgttattctcaaatgacgaacggtgaa
gcgggtgtggttgaagcgttaatcgcagaagcagggaatgtcactattgcactaccttct
gatgcaggatctgcaagtttacgtgaagcacaaacagatgaaaatgatttattctataag
cctaagatgttagggcgtcgtttccaaggtgttgcccaagatggcgggattgaaacaagt
gtggtaaacattgaagcgcaacgtgatatgagcgcaacgatgaaagcagttgaaaaattc
tggattacgtatgaacaagaaggcgtaccgcaagaaaaggcccatgtagttgctaatgaa
ctagaggtttggaaagcgaatacggcctatcaagaaattgaacaaatggctcgtcaaatt
cgacaagaagtggccatgggtaatgcccgttatcgcgattatttgttgatggcgcgtgat
ctgaatccatataccaacatgattccagcgatttttaatcgcatgggtattccgttcttt
atggatgcggacaagcaaatgaacacgcatccgttggtagcgtttattaagcaattattg
ggattagaacgcttcacaacacgtacattgatgcaattattgaaaaatgaattacttgta
ccaaccgatgtggatattcaagactaccgggaagcgttggcgattactgaaaattacgtg
ctagctaagaatattcaaggatggcaatgggaatcagagacaccgtggcaatatgattgg
aaggtttcaaatgtcgaagatgaggcgacgcaagcacaattaactttacgtaaccgtcaa
ctggctttgattcatgaccaagttagtcaaatcattgtgccttttttgcaggcattaaag
gacgcaccggatacgcaaacaatggtgcgagcattgtatgtctttttgactgagcaaggt
gtgagcgcacgtttgctaggttggcgtgatgaagcaattcaacaaggtgatttgttccgt
gggcaacaaccagaacaagtttggcaaactttgatgaatctcttggacgatttcgtggat
atctttggaaatgaacatatgagtgtgccggatttacgtgaaaccttagtcgctggtttt
gacagtgcgacatacacaggtattccagccacgatggaccaagttcgtattactgaaagt
ggaatcgtgcaaggacagaactatcaaacagcaattatttttggtgccacagcccaacaa
ttgccggcaacgactcgtacaaaagcgattttgaatgatggggatcgtgaattgctcttg
ccattactaccagagtcagcgaaattacgtgatacagcagataagcaaatggccgaagaa
tcacttttgatgtataacgccatgatgagtccaacccaacgtttaatttggtcatatcca
acgagtgacggggatagtagtttatccggatcaacttatatcgttcgtttaaacgctcat
tttgtgaacatggcagaaacaacatttgtgccattacctgacccaacgagtgaaaatatc
ggacaattcgtcggctctccagccacgactttggcgcatgtcattcgtatggaacaaatt
gcgcatctaaacaaattgccaattagtactgcatggcaaagtctacgccaacaagtatca
caaattaaacctgaaatgacgatgcatctgatgcagagtttgaattatcacaaccaggtt
gcccagctatcaagtggattagtggacgctttatttggacgtgatttgaagatgtcagtg
tctcgcctacaaacttttgcacgcaatccatatgaatttttcttatcatatgggcttcgt
ttgcaagaacgacaagtcttacagctaacccctgcagataaaggaacgttaattcacgcc
ggctttgaacaatttttcatgtcgttaattcaagaaaatctcgtactaggtgaattaacg
gatactgagattactcagcgcgtgacgaaaacaatggaaactatcttagcgggcgaagaa
caagaattagaaattttcaaaagttcaccacagatggcttatttgacaacccaattggtt
caacaagttgcggcaacggtattgaagatgaagcgtggtcaaccaaccaaccatcgtgtg
caaacacaagcggtcgaaacaacatttggattgggtgctcaaggcttagcgccggtaaag
tatgatcttaaccaaggtagtttaactttgcgtggaaagattgaccgtatggatgaaatg
caagctggcgaccaacgttttgttactgtcgttgattacaagtctagtgaacgtgatttc
aaattgaataaggttattgccggacttgaattacaattaatgacttattgggcagcgatt
gcacaaaacacaacgacaccggtgggtggtgcattgtattggaatgcacaagtaccatgg
gttaaagcaagtgatttagacagtaatttagcttggtcagagatggtttcagctagtaca
gaagtgaatgcgaccaatggaagttacgccggtgtgttgactcgagatgaatcataccta
gagacgttagacccacaagaaggacaacctagcttgtacggctttaagcgtacgtcaaag
ggagcgattagtaagacaggtgataatacctatactgatgatgaattagctgttttgaca
caatttaacgaatatcaagttcgtcgtattggggatgaaattctaacgggtcattttgat
ctacaaccatttaaagatgggaatacgtcaactggcttagccaatagtgcatataagccg
gtgatgatgtttgatgcggcattgggaaaccaatataaagacatcagtatgttcccaaca
aagcgtcaagatgcgttaacttggatgcaagaagagatggaggaagaggaatga
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