Weissella tructae W-1: KHQ32_00280
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Entry
KHQ32_00280 CDS
T08629
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
wtr
Weissella tructae W-1
Brite
KEGG Orthology (KO) [BR:
wtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wtr03400
]
KHQ32_00280 (addA)
Enzymes [BR:
wtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ32_00280 (addA)
DNA repair and recombination proteins [BR:
wtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KHQ32_00280 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_12
PDDEXK_1
ResIII
AAA_16
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QVV91390
LinkDB
All DBs
Position
53127..56924
Genome browser
AA seq
1265 aa
AA seq
DB search
MNFTPTQSAAIETKGKNILVSASAGSGKTRVLVERVLRRLLAGENINEFLIVTFTEAAAA
EMKERLEKVIRTNLQDAEGDQRQHLLKQLRLLNVANISTLHAFALRLIEQYHYTIDLDPQ
FRLLDDAERTLLMHNVYQSLLNDAYENDDAGTFKALVTQFKSASQDDGPLREAVFTLFNF
AMARPDTSEWLANLVTAYAYEGNFTQTVFYQTEVLPLLKAEIIGLAAEAERALRQAPDTD
ESEAALNRKANLENDADFFDSMNQMLANPDLSWDDLRRMMLNDDQPTKWGAARHAKAKAS
RFSKDDAELKEAWDAVKIGRDYRLTQLDKLRSQYFILDEAGQEVALTGAQATLRQLVTFT
EQFRDAFLKEKLAQKTVDFNDLEHFALEIVQQDAVVQELSARYSEVMVDEYQDTNQLQEA
ILSRIAGDDNTFQVGDIKQSIYKFRQADPSLFGSKLHDYPLDDQSDVITLQENFRSHPNV
TKFINYIFGQIMSEQLGDVEYTGTAELVAGADYYPKEVSKHAELLVYLSEVDDDADKYTS
TIGQIRLMAWKIKALMADETTRIFDREEKELRRPTYDDFTILVPTKLQNLDVIDVFNKLD
LPLAVDGTENFFQTTEISVMLSLLRIIDNPHQDIPLAAVLRSPMYGLDENALAVIRLQDM
QGDFYQALTCFNELEIADVTFGGMDVEAIQRIKMIVSRFMDQLAEFKILATQNQLVDLIW
RIFDKTGWLDYVGGLPSGPQRQANLHALYERAASFQQSNFVGLYQFVSYITELQEKERDL
GVADANVTDNSIRLMTIHRSKGLEFPIVFLLNSTRDMVSTNEVKGKVLVDAYAGAGIDYV
DVEHQLQLPTIQREVVKTARQKGAFAEQLRVLYVALTRAEQEVFLVGSYDTAKQMLDKWQ
LSQHGQDWMLPEWVRLQGKSYMDLAGMALLRHPDIEQRLHITDAEVDLTDIKPLVPKDEF
VKPAEEEMAEFLANQLKFNIDTKTFSELQADEVAQYDAKIVETTPVVDPLITNVDVTNWQ
PVLEYDYSFDSATHATAYQSVSEVKRLFEDPDLTAGRGVADTRLDPQATTGLRFVNDELP
EPKFMQVATNQVTAAAIGTGTHLVLQSINLAKGVPTLDGIGQTIDDLVKSELLDVAVAKK
INRESILTFFTGTDLGQQMVLNQASLKREVPFSLLLDAKMLYKDFAGDDRVLVHGIIDGY
FMKGDELWLFDYKTDRMIDDNAEQMLKERYAGQLNIYAQALIAMGLPQPKKFIYALSIGK
TIELG
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacgccaacgcaatcggcagcgattgaaacaaaaggtaaaaatattctagtt
tcggcttcagccggatctgggaaaacgcgtgtcctagttgaacgtgtgttgcgtcgcttg
ttggctggtgagaacatcaatgaatttttgattgtaacttttaccgaagccgcagccgca
gaaatgaaagaacgactagaaaaggttattcgcaccaatttacaggatgctgaaggagac
caacgccaacatttattgaaacaattacgtttgttgaatgtggctaatatttcgacactg
cacgcctttgcgctacgtctcattgaacaatatcactatacaattgatttggatccacaa
tttcgattgttagatgatgctgagcggactttattgatgcacaatgtgtatcaatctctt
ttgaatgatgcctatgaaaatgatgatgcggggacctttaaagcgttggtcacgcaattt
aaatctgcaagtcaagatgatggtcccttacgggaagcagtctttacgctatttaatttt
gcaatggcacgaccagatacgtcagaatggttagctaatttggtcacagcatacgcatat
gaaggtaactttacgcaaacagtgttttaccaaacggaagttctgccattattgaaggct
gaaatcattggattagcagcggaagcagagcgtgcgttacgccaagcaccagatacagat
gaaagtgaagcagcattaaatcgtaaagcgaatttggaaaacgatgccgatttctttgat
agcatgaaccaaatgttggcgaatcctgatttgagttgggatgatttacgtcgcatgatg
ttaaatgatgaccaacctacaaagtggggagcagcacgtcatgcaaaagcgaaagccagt
cgttttagtaaagatgacgcagaactgaaagaagcctgggatgcagttaaaattgggcgt
gactatcgtttaacacaattggataaattgcgtagccaatactttatcttggatgaggct
gggcaagaggtggcgttgactggtgcgcaagcaacattacgtcaattagtgacctttaca
gaacaattccgagatgcgtttttgaaagaaaaattggcacaaaagacggttgattttaat
gacctggaacattttgcgttagaaattgtgcaacaagatgccgttgtacaagaattgtca
gcgcgttacagcgaagtcatggtcgatgaataccaagacacaaatcaattacaagaagcc
atcttgagtcggattgctggggatgataataccttccaagtaggagatattaagcaatcg
atttataagttccgacaagccgacccttctttgtttgggagtaaattacatgactatccg
ttggatgatcaaagtgatgtgattaccctacaagagaatttccgttcacatcctaatgtt
acgaagtttattaactacattttcggacaaattatgagtgaacaattaggggatgtggaa
tataccggtacggcagaattagtggctggtgcggattattatcccaaagaagtaagtaag
catgcagagttgttggtttatctgagcgaagttgacgatgatgctgataagtacacaagt
accattggacaaattcgcttaatggcttggaaaattaaagcgttgatggctgatgaaaca
acacgtatttttgatcgtgaagagaaagaattacgtcgaccaacctatgatgactttaca
attctggtgccgactaaattacagaacttagatgtgattgatgtcttcaataaattggac
ttaccattggcggtggatgggaccgaaaactttttccaaaccactgaaatttccgtcatg
ctgagcttgttgcgtatcattgataatccacatcaagatatcccgttggcggcggtatta
cgttcaccaatgtatgggcttgatgaaaatgcattggctgtaatccgtttacaagatatg
cagggtgatttttatcaagcattaacatgtttcaatgaattggaaattgctgatgtgacc
tttggtgggatggatgtggaagccattcagcgcattaagatgattgttagtcgctttatg
gatcaactagctgaatttaagattttggcgacacaaaatcaattggttgacttgatttgg
cgtatttttgataagacaggttggctagattacgtgggtggcttaccgtctggaccacaa
cgtcaagcgaatttacatgcgctatatgaacgagccgctagtttccaacaatcgaatttt
gttggcttgtatcaattcgtcagctacattactgaattacaagaaaaagaacgtgattta
ggtgttgcggatgccaatgttacggataacagtattcgtttgatgaccatccatcgttca
aaaggattggaatttccaattgtattcttactaaacagtacccgcgacatggtttctacc
aatgaagttaaggggaaagtgttagtggatgcgtatgcaggagctggaattgattacgtt
gatgtggaacatcaactgcaattgccaacaattcaacgtgaagtcgttaaaacggcccgc
caaaaaggtgcctttgcggaacaattacgtgtgctgtatgttgcgttgacacgtgcggaa
caagaagtgttcctagtgggatcatatgatactgctaagcaaatgctcgataagtggcaa
ttgagtcaacatggacaagactggatgttacctgaatgggtacgtctacaaggaaagtca
tatatggatttggcagggatggccttgttacgtcatcctgatattgaacaacgcttgcac
atcacagatgctgaagttgacttgacggatattaaaccattagtaccaaaggatgaattc
gtgaagccagcagaagaagagatggcggaatttttggcgaatcagctcaaattcaatatc
gatactaagacattttcagagttgcaagccgatgaagtagctcaatatgatgcaaaaatt
gttgagactacgccggttgttgatccgctaatcacaaatgtggatgtaacgaattggcaa
ccagttctagaatatgattattcatttgattcagcgacacatgcaacagcctatcaatct
gtttcagaagtaaagcgtctatttgaagacccagaccttacagcaggacgtggtgtggca
gatacgcgtctagatccacaagccacgactggattgcgttttgtaaatgatgaattgcca
gaacctaaattcatgcaagtggcgactaatcaagttactgcagctgcaattggaacgggg
acgcatttagtgttgcaaagtattaatctagctaagggtgttccaacgttagatggcatt
gggcaaacaatcgatgatttggttaaatcagaattattagatgttgctgtcgccaagaaa
atcaatcgagaaagtatcctaacattctttactggaaccgatttaggccaacagatggtc
ttgaaccaggctagtttaaagcgagaagtgcccttttcattgttgttggatgcgaaaatg
ttatataaagactttgcaggcgacgatcgtgtgttagtgcatggtattatcgatggatat
ttcatgaagggggatgaattatggttatttgactataaaacagaccgcatgattgatgat
aatgctgagcaaatgcttaaagaacgctatgcggggcaattaaatatctatgcgcaggca
ctaattgcaatgggattgccacaacctaagaagtttatctatgcattatcaattggaaaa
acaattgaattaggataa
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integrated database retrieval system
