Weissella tructae W-1: KHQ32_02275
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Entry
KHQ32_02275 CDS
T08629
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wtr
Weissella tructae W-1
Brite
KEGG Orthology (KO) [BR:
wtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wtr03019
]
KHQ32_02275
03009 Ribosome biogenesis [BR:
wtr03009
]
KHQ32_02275
Enzymes [BR:
wtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KHQ32_02275
Messenger RNA biogenesis [BR:
wtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KHQ32_02275
Ribosome biogenesis [BR:
wtr03009
]
Prokaryotic type
rRNA helicases
KHQ32_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Wzy_C_2
Mito_fiss_Elm1
Motif
Other DBs
NCBI-ProteinID:
QVV91721
LinkDB
All DBs
Position
462846..464198
Genome browser
AA seq
450 aa
AA seq
DB search
MAKFTDYNLRPEIYRGLEAIRFTTPTPVQERFIPVVLQGRSVVGQSQTGSGKTHAFLIPI
FEKLDVNAKQVQAIITTPSRELAQQIYDASQKMADAFPEDARPKVGVYVGGTDKARQIQQ
LQNNQPQIVIGTPGRIKDLYKSGALDIHTAKTLVIDEADMTMDLGFMPEVDAIAGALPEN
LQMLVFSATIPQKLQPFLKKYLSNPVVDEIPTTTVIAPTIENILLETKGKEKDQVVYDLL
TMGDPYMALVFTNTKERAKELSRNLKERGLKVAEIHGGIQPRERRRTMNQIQHLDYQYVV
ATDLAARGIDIPGVSLIINDGIPNDLEFFVHRVGRTGRNGMDGRAITLYSPDEEDKVAAV
EQLGVTFEPMALKKGELTPGFDRRRRKQRSKSSEKLDPTMIGMVKKKKKTVKPGYKRRIK
NEIARDAKYKKRIEQRQTDRATRKARKQQG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatttacagattataatctacgtcccgaaatttaccgtggactagaagcaatt
cgcttcacaacgccaacgccagttcaagaacgttttatcccagttgtcctacaaggacgc
tcagtggtaggacaatcacaaactggttctggaaagacacacgcatttttgattccaatt
tttgagaagctagatgttaatgctaagcaagtacaagcaattatcacaacaccttcacgt
gaattggcacaacaaatttacgatgctagccaaaagatggccgatgcattccctgaagac
gcacgtccaaaggttggtgtttacgttggtggaactgacaaggcacgtcaaattcaacaa
ttgcaaaacaaccaaccacaaatcgtgattggaacaccaggtcgtatcaaggacttgtac
aagagtggtgctttggatatccatactgcaaagacattggttatcgacgaagccgacatg
acaatggacttaggatttatgcctgaagttgatgccattgcgggtgcattgcctgaaaac
ctacaaatgttggttttctcagcaacaattccacaaaagctacaaccattcttgaagaag
tacctaagcaacccagttgtggatgaaattccaacaacaactgttattgcaccaacaatt
gaaaacattttgttggaaacaaagggtaaagaaaaggatcaagttgtttatgatcttttg
acaatgggagacccatacatggccttggtatttacaaatactaaggaacgtgcgaaggaa
ctttctcgtaacttgaaagaacgtggattgaaggttgcggaaatccacggtggtatccaa
ccacgtgaacgtcgtcgtacaatgaatcaaatccaacacttggactatcaatatgttgtt
gcgactgacttggccgcacgtggaattgatatcccaggagtttcattgatcattaacgat
ggtattccgaatgacctagaattcttcgttcaccgtgttggtcgtactggacgtaacggt
atggatggtcgtgcaattacattgtactcaccagatgaagaagataaggttgcagcggtt
gaacaattaggtgttactttcgaaccaatggcattgaagaagggtgaactaacacctgga
tttgaccgtcgtcgtcgtaagcaacgttcaaagtcttcagaaaagctagatccaacaatg
attggaatggttaagaagaagaagaagactgttaagcctggttacaagcgtcgtattaag
aacgaaattgctcgtgatgcgaagtacaagaagcgtattgaacaacgtcaaacagaccgt
gcaacacgtaaggctcgtaagcaacaagggtaa
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