Weeksella virosa: Weevi_0342
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Entry
Weevi_0342 CDS
T01441
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
wvi
Weeksella virosa
Brite
KEGG Orthology (KO) [BR:
wvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wvi03400
]
Weevi_0342
DNA repair and recombination proteins [BR:
wvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Weevi_0342
Archaeal homologous recombinant proteins
Weevi_0342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
ABC_tran
DUF1796
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ADX67062
UniProt:
F0NY71
LinkDB
All DBs
Position
327056..330088
Genome browser
AA seq
1010 aa
AA seq
DB search
MLPLVLRFEGLYSYQEPQEIDFSSLIDAGLFGIFGKVGSGKSTILEAITFALYGNSDRLG
SSKFTYNMMNLKSNKMLIDFEFLNHENKKYKIVREYRRNRNNFEIITQKNAQLYEFRSND
WYPLESLDVEPIIGLSSDNFRRTIIIPQGKFQEFIQLTPTQRTHMLKEIFSLQRFDLQDK
VSAFNKNNLELLNKNTGRLSTFENVTETQIEELSSQLSTSIIQEEKYRTEHQNLQEVVEK
LRQLKETLEEQQSKKKALEKLLIEEKGIRTLEKQTKQYEQLSQGFSHGFDEQNKLQKKVN
DFLDEQQKEEKELLLLKDKINQTEKEMASLLPQFEALADKKIEEKDLEFILSILRDQAEI
ENLQLRSRKGIEMITEEEKKETSHRNLLATLQNKQKELEQKRENIEELYEIEKWYQKYEI
LEKQIAEQENKISKNKADILSTEKQFNPHLATQETLTRVIDEEFSKLEKSNETLREQIQN
LTVRQQLSHYAMHLHEGEACPLCGSLQHPNLIDDDVSEQLQNLRNKLLLGQEKEKTLQKD
RRNLENSFSEIKFRKEQLAKEELELEKLFSNQKNLIDTFVWKKFRPTQKNDFLAKKKQAL
EIENLLTEATKEIENERLLLDNTLKNIEKYKEGIQGFRDKENQAKARIELNSKNLQRLSV
SDYAQQSQQEIRLTLDSLKSRNLEIEQKQIALQEEKNNLLPKVAKKEAMFNSIAKQLHLA
KTELISIEKTLLERLSTTEFTTLEEVKRIVHSGLNVDENWAKIHQFELEKNALSEMVLEL
ENKLKDQVFEEENYQTKITELASLAQKHKESNERMIALKTEKERLEKAFEEKKNLLKEQE
KLERKAQNLSTLQNLFNRAGFVQYISGIYLQQLCDNANVRFHRMTRNQLSLQINENSDFE
IIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQENVSTNKNFFFIDEGFGTQDSEA
VNIVFETLLSLQKENRIVGIISHVDELKERIPITLSITKDEVKGSRIDLQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgttacctcttgttttacgtttcgaaggtttatactcgtaccaagaaccccaagaaatc
gatttttcttctttgattgatgcaggattatttggaattttcggaaaagtaggaagcgga
aaatcaaccattctagaagcgattacttttgctttgtacggaaattctgaccgtttgggt
tcgtctaaatttacgtataatatgatgaatctgaaatcgaataaaatgttgatcgatttc
gagttcttaaaccatgaaaataaaaaatataaaatcgttcgtgaatatcgacgaaatcgc
aataatttcgagattattacacagaaaaatgcacaattgtatgagtttcgatcgaatgat
tggtatccactagaaagtttagatgttgagccaattattggtttgagttctgataatttt
cgtcgaacgataattattccacaagggaaatttcaggagtttattcagcttactccgaca
caaagaacgcatatgttgaaggaaatcttctctcttcaacgttttgatttacaagacaaa
gtaagtgccttcaacaaaaataacctagaattactcaataaaaatacaggtagactttcc
acattcgaaaacgtcaccgaaactcaaatagaagaactttcatcgcaactttctacttcg
atcatacaagaagaaaaatatcgaacagaacaccaaaatttgcaagaagttgtagaaaag
ctaagacaactaaaagaaactttagaagaacaacaatctaaaaagaaagcacttgaaaaa
ctactaatagaagaaaaaggtatccgaacattagaaaaacaaaccaagcaatacgaacaa
ctttcgcaaggtttttctcatggtttcgatgaacaaaataaactgcaaaagaaagtaaat
gattttttggatgagcagcaaaaagaagaaaaagaattgcttttgctgaaggataaaatc
aaccaaacagaaaaagaaatggcaagtcttcttccccaattcgaagctttagcagataaa
aaaatagaggaaaaagatttagagtttatcctctctattctgcgagatcaagcagaaata
gaaaatctacaactacgctctagaaaaggaatcgaaatgattacagaagaagaaaagaaa
gaaacttctcaccgaaatcttcttgcaacattgcaaaacaaacaaaaagaactcgaacaa
aaaagagaaaatatagaagagctatacgagatagaaaaatggtatcagaagtatgaaata
ttagagaaacaaattgcggaacaagaaaataaaatatcaaaaaacaaagcagatatttta
tcgacagagaagcaattcaatccgcatttagcaacgcaagaaacccttacaagggttatt
gatgaagagttttcgaagttagaaaaatcgaatgaaactttgcgagaacagattcaaaac
ctcaccgttcgacaacaattatcgcattatgcaatgcatttgcacgaaggcgaagcctgc
cctctgtgtggctctctgcaacatcctaatttgatagacgatgatgttagcgagcaatta
cagaacctaagaaataagttattgctaggacaagaaaaagaaaaaactttgcaaaaagat
cgtcgaaacctggaaaatagtttttctgaaataaagtttagaaaagagcaattagcaaag
gaagaactagagcttgagaaattattttcgaaccaaaaaaatcttatcgatacattcgtt
tggaaaaagtttcgacctacacaaaaaaatgattttttagccaaaaagaaacaagcttta
gagatagaaaatcttctaaccgaagctaccaaagaaatagaaaatgaacgtttactgttg
gataatacgttaaaaaacattgagaaatacaaagaaggaattcaagggtttcgcgataaa
gaaaaccaagcaaaggcaagaatagaactcaacagcaaaaacctacaacgcttatcggta
agcgattatgcgcagcaatcgcaacaagaaatccgattgactttggacagtttgaaaagt
agaaacttagaaatcgaacaaaagcaaatcgccttacaagaagaaaaaaacaacctttta
ccaaaagttgccaagaaagaagccatgttcaattctattgcaaaacaacttcatcttgcc
aaaactgaactaatttcgatagaaaaaactttgttagaacgtttatcgaccaccgaattt
acaaccctcgaagaggtgaaaagaatcgtacactcggggctgaatgtggatgaaaattgg
gcgaaaattcaccagttcgaattggaaaaaaatgcattgagcgaaatggttctcgagttg
gaaaacaaactgaaagatcaggttttcgaagaagaaaattatcaaaccaaaataacagaa
ctcgcatcattggcacaaaaacacaaagagtcgaatgagcgaatgattgcgctaaaaact
gaaaaagaaaggctagaaaaagcattcgaagagaaaaaaaacttactcaaggaacaagaa
aaactcgagcgaaaagcacaaaatttatcgactttgcaaaaccttttcaatcgagcaggc
tttgtgcaatatatttcgggcatctatctacaacaattgtgtgacaatgcaaatgtacga
ttccatcggatgacgagaaatcaacttagtttacaaataaatgaaaattctgatttcgaa
attattgattatctgaatgaaggaaaaagtcgaagtgtaaaaaccctttcgggtggacaa
gcctttcaggtttcgttgagtttggcgcttgctttggcagaaagtgtgcaagaaaatgtt
tcgaccaacaaaaactttttctttatcgatgaaggatttggtacgcaagatagcgaagcg
gtaaatattgttttcgaaaccttattgagtttacaaaaagaaaatcgaattgtaggaata
atttcgcacgtcgatgagctaaaagagcgcattcccattaccttatcgatcacgaaagat
gaagtaaaaggaagtcgaattgacctgcaataa
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