Weeksella virosa: Weevi_0634
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Entry
Weevi_0634 CDS
T01441
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
wvi
Weeksella virosa
Pathway
wvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Weevi_0634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wvi03019
]
Weevi_0634
03400 DNA repair and recombination proteins [BR:
wvi03400
]
Weevi_0634
Enzymes [BR:
wvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Weevi_0634
Messenger RNA biogenesis [BR:
wvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Weevi_0634
DNA repair and recombination proteins [BR:
wvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Weevi_0634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Peptidase_C36
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ADX67351
UniProt:
F0P004
LinkDB
All DBs
Position
complement(645288..647483)
Genome browser
AA seq
731 aa
AA seq
DB search
MMETHTKDLSSYLKKYFGYDQFKGQQEEIIKTLLNNQDVFVLMPTGGGKSMCYQLPALMS
EGVAIIVSPLIALMKNQVDALRGISTNEVAHVLNSSLNKSETKIVMDDIRAGKTKMLYVA
PESLTKEEYIDFFKTVKISFFAIDEAHCISEWGHDFRPEYRNLKSIIQKIGNAPIIALTA
TATPKVQEDIQKTLGMQDARVFKDSFNRPNLFYEVRPKINQDKEIVKFIKKRQGKSGVVY
CLSRKKVEELTQLLQVNGIKAIPYHAGLDAKTRSKHQDMFLMEDVDVVVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGECVAFYDYKDIEKLEKFLASKPVAEREI
GMQLLNEVAAYAETSMSRRKFLLHYFGEEFDEVNGAGANMDDNMRNPKKMMDATREAQQV
LTIVEKTNQKLRIADIVHILVGKENSITKSFNLQSEPYFGIGKDQEDYFWKTVVRQLIVH
NYLKKEIETYGLLKITEQGREFLDNPTKFEIAQDIDYKKLLDGGIVDETPTSPAAFDDRL
LKHLKELRKKIAKKHQLPPFAVFQDASLDDMTMQYPTNLVELTNVYGVGEGKAKKFGKEF
VAYIAQYVEDNQIERPDDMVIKQVADKTSHKVYIIQSTDRKLDLADVASAKNLSMDELLS
EMESIVYQGTKLNINYYIDEVLDEDQQEEIFDYLMEAENDSMANLLDEFSDDYDEEELRL
MRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacgcatacaaaagatttatctagctaccttaagaaatactttgggtatgat
caatttaaggggcaacaagaagaaattattaaaacgcttttgaataaccaagatgttttt
gtactgatgccaactggcggaggaaaatctatgtgttatcaattgccagccttgatgtcg
gaaggggtggccattatagtatcgccactaattgcattgatgaaaaatcaagtagatgcg
ttacgtggcatatcgaccaatgaagtagctcatgtattaaattcgtcgctcaacaaatcc
gaaacaaaaattgtgatggacgatattcgagcaggtaaaacaaaaatgttgtatgtagca
ccagagtcattaaccaaagaagagtatatcgattttttcaaaacggtaaaaatttctttt
ttcgctatagacgaggctcattgtatatcagaatggggtcatgattttcgtccagaatac
cgaaatctaaagtccattatccaaaaaatagggaatgctcctattatagcactcactgct
acagcaacaccaaaagtacaagaagatatccaaaaaacattgggcatgcaagatgctagg
gttttcaaagactcgttcaatcgtcccaatcttttttatgaagttcgtccgaaaattaat
caagacaaagaaattgtaaaattcatcaaaaaaagacaaggaaaatcaggagtcgtgtac
tgtcttagtcgaaaaaaagttgaagaattaacacaacttcttcaagtaaacggaataaag
gcgatcccgtaccatgctggtttagatgctaaaacaagaagtaaacaccaagatatgttc
cttatggaagatgtagatgttgtggtggcgaccattgcttttgggatgggaatcgataaa
cccgatgtacgatttgttattcattacgatattccaaaatctttagagagctattatcaa
gagactggacgagcaggtcgagatggtggagaaggagaatgtgtggctttttacgattat
aaagatatcgaaaaactagagaagtttttggctagtaaaccagttgcagaacgagagatc
ggtatgcaactgttgaatgaagtggcagcatatgccgagacttctatgtcgagaagaaaa
tttttgctccattatttcggagaagaattcgatgaagtaaacggtgcgggtgctaatatg
gacgataatatgcgtaatcctaaaaaaatgatggatgctacccgagaagcacagcaagtt
ttgaccattgtagagaaaaccaatcaaaaattacgtattgctgatatagtccatatattg
gttggcaaagaaaactctataaccaaatcattcaacttacaatcagaaccatattttggg
atcgggaaagaccaagaagattatttctggaaaacggtagtacgacaattaatcgtccat
aattatctcaaaaaagaaatagaaacttatggattactgaaaataactgagcaaggaaga
gaatttttagacaatccgactaaattcgagattgctcaagatatagattataaaaagcta
ctcgatggaggaatagtagatgaaacacctacttcacctgcagcttttgatgatcgactt
ctaaaacatctcaaagaattaagaaaaaaaattgctaagaagcatcagttgcctcccttt
gccgtttttcaggacgcaagtttagatgacatgaccatgcaataccctaccaatctcgtc
gagcttaccaacgtatatggagtaggagaaggaaaagcaaaaaagttcgggaaagaattt
gtagcctacattgcacagtatgtagaagataaccagatcgaacgaccagatgacatggta
atcaaacaagtggccgataaaacaagtcataaagtatatattatccaatctactgatcga
aaactcgatttagcagatgtagcttctgcgaagaacctttcgatggatgagttattgtca
gaaatggaaagtatagtttatcagggaacaaagttgaatatcaattattatatagatgag
gttttggatgaagatcaacaagaagaaattttcgactatttgatggaagccgaaaacgac
tcgatggcgaatcttctcgatgaatttagcgatgattacgacgaagaagaactgcgattg
atgcgaataaaatttataagtgaagtcgcaaattga
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