Weeksella virosa: Weevi_1404
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Entry
Weevi_1404 CDS
T01441
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wvi
Weeksella virosa
Pathway
wvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Weevi_1404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wvi03021
]
Weevi_1404
03400 DNA repair and recombination proteins [BR:
wvi03400
]
Weevi_1404
Enzymes [BR:
wvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Weevi_1404
Transcription machinery [BR:
wvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Weevi_1404
DNA repair and recombination proteins [BR:
wvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Weevi_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ADX68105
UniProt:
F0NYA8
LinkDB
All DBs
Position
1478400..1479392
Genome browser
AA seq
330 aa
AA seq
DB search
MSILNFIKPDKVILIESDTQFGQFEFRPLEPGYGITVGNALRRVLLSSLEGYAITSIKIE
GVEHEFSTIPGVVEDVTEIILNLKKVRFKKQIDESDAENVTATISGQDQLTAGDLGKFIS
GFQVLNPELVIANLDSKVNLTISFTIEKGRGYVPAEENKKASAPIGTIAIDSIYTPIKNV
KYAIENYRVEQKTDYEKLVFEITTDGSISPQDALTEAAKILIHHFMLFSDERITLEAEEV
ASGEAYDEEALHMRQLLKTKLVDLDLSVRALNCLKAAEVETLGELVSFAKSDLMKFRNFG
KKSLSELEELVDSKGLSFGMDTSKYKLDVE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctatattaaatttcatcaaacctgataaagtaatcttaatcgaatctgatactcag
ttcggacagtttgagtttcgaccattagagccaggttatgggattacggttggaaacgca
ttaagaagagttttgttatcttctttagagggatatgcaataacctctattaaaatagaa
ggtgtagagcatgagttttcaactattccaggggtagtggaagacgttacagaaattatt
cttaatctgaaaaaggttcgtttcaaaaaacaaattgatgaatcagatgctgaaaatgta
actgcaactatctcaggacaagatcaattaacagcaggtgatttaggtaaatttatctca
ggtttccaagtattaaatcctgaattggttatcgctaacttagattctaaagtaaactta
actatttcgtttactatagaaaaaggtagaggatacgtaccagctgaagagaataaaaaa
gcttctgcgcctatcggaacaatagcgattgattctatttatacgcctattaagaacgta
aaatatgcaatcgaaaactatcgtgtagaacaaaaaactgattatgaaaaattggttttt
gaaattactaccgacggatctatttctccacaagacgcattaaccgaagcagcaaaaatc
ttaatacatcactttatgttgttctcggatgagagaattacattagaagctgaagaagtt
gcatcaggtgaagcatatgatgaagaagctctacatatgcgccaactactaaaaactaaa
ttagtagacttggatttatcggttagagcattaaactgtttaaaagccgcggaagtagaa
acactaggagaactagtttctttcgcaaagtctgatttaatgaaattcagaaacttcggt
aaaaaatcattatccgaattggaagaattggtagatagcaaaggtctaagctttggtatg
gatacctctaagtataaattagacgtagaataa
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