Weeksella virosa: Weevi_1887
Help
Entry
Weevi_1887 CDS
T01441
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
wvi
Weeksella virosa
Pathway
wvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Weevi_1887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wvi03019
]
Weevi_1887
Messenger RNA biogenesis [BR:
wvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Weevi_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF3836
UPF0154
Chordopox_G3
DUF4748
Motif
Other DBs
NCBI-ProteinID:
ADX68574
UniProt:
F0P0Z0
LinkDB
All DBs
Position
2021027..2022589
Genome browser
AA seq
520 aa
AA seq
DB search
MEVLIGVIALLVGAAIGYFLSKKSVDKENQLLIEQAKQQADALIKEAQKEGENIKKEKIF
QAKEKFLELKSKHEESVNQRERKIADQEFRLKEREDRVKSDLAEVQKAKDGLKAEQGNIK
ARTEKLNIRQREVDSMHKKQVETLEKISHFSADEARAELMEILKDEAKTKAQAHIQEIME
EAELNARNEARKIVIQAIQRIGTEQAIENAVSVFNIESDEIKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVAKTTKQIEDEII
EVGKKTILDLGIHGLHKDLVRIIGRMKYRSSYGQNLLQHSREVAHIAGTLAAELGLNAKL
AKRAGLLHDIGKVPEQESEMPHAILGMQWAEKYGENADVVNAIGAHHDEIEMTSLIAPIV
QVADAISGARPGARRQVLESYIQRLKDLETTALNFDGVEKAYAIQAGRELRVMVESEKVD
DAKAAELSFLISDKIQNEMTYPGQVRVTVIRETRAVNIAR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaagtattaattggcgtaattgctttattggtcggtgctgcaataggatacttttta
tcgaaaaaatcagttgataaagagaatcaattactcatcgaacaagcaaaacagcaagcc
gatgctttaattaaagaagcacaaaaagaaggagaaaacattaagaaagagaagattttt
caggcaaaagagaaatttttagaattaaagtcaaaacacgaagagtcggtaaatcagcgc
gaaagaaaaattgctgatcaagaattcagactaaaagaacgcgaagaccgtgtaaagagt
gatttagccgaagtgcaaaaagctaaagatggcttgaaagctgagcaaggaaacatcaaa
gcacgcacagaaaagctgaatattcgacaacgagaggtagactctatgcacaaaaaacaa
gtagaaacattagagaaaatttctcatttttctgcagatgaagcacgtgcagagttgatg
gaaattctgaaagacgaagccaaaactaaagctcaggctcatattcaggaaataatggaa
gaagccgagttgaacgctagaaatgaagcaagaaaaattgttatacaagcaattcaaaga
atcggaacagaacaagcaatcgaaaacgcagtatctgttttcaatatagaatcggacgaa
ataaaaggtagaattattgggcgagaaggtagaaatattcgtgcactagaagctgctaca
ggtgtagaaattatcgtagacgacacaccagaggcaattatattatcatgttttgatcct
gttcgacgagaaattgctcgcctgtcactgcaccgattagtgaccgatggtcgtatacat
cctgcacgcatcgaagaagtagttgccaaaacaacaaaacaaatcgaggatgaaattatc
gaggtaggaaagaaaacaattctcgacctaggtatccatggattacacaaagatttggtt
cgcataataggtaggatgaaataccgttcttcgtatgggcagaatttgctgcaacactct
agagaagtagctcatattgccggaacactagccgcagaactaggtctgaatgcaaaacta
gcaaaacgagcaggtttattgcatgatattgggaaagttccggagcaagagtcagaaatg
cctcacgcaattttaggaatgcaatgggcagaaaaatatggagagaatgcagacgttgtg
aatgcaattggtgctcaccacgatgaaatagaaatgacatcattaattgcaccaatcgta
caggtggccgatgctatttcaggtgctagacctggagcacgtcgtcaagtattagaatct
tacattcaacgattaaaagatctagaaactactgcattgaattttgatggagtagaaaaa
gcatatgctatacaagccggtagagaattacgtgtaatggtcgaaagtgaaaaagttgat
gatgccaaagcagctgagttgtcgtttttgatttcggataaaatccaaaatgaaatgacg
tatccagggcaagtacgcgtaactgtaatacgtgaaacacgtgctgtaaacattgcgcgc
taa
DBGET
integrated database retrieval system
