Weissella viridescens: IE337_02855
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Entry
IE337_02855 CDS
T06991
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
wvr
Weissella viridescens
Pathway
wvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IE337_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wvr03400
]
IE337_02855
Enzymes [BR:
wvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IE337_02855
DNA repair and recombination proteins [BR:
wvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IE337_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
NTPase_1
AAA_5
UvrD_C
PIF1
Mg_chelatase
UvrD-helicase
NPHP3_N
T2SSE
AAA_12
RsgA_GTPase
SLFN-g3_helicase
AAA_28
nSTAND3
HTH_IclR
AAA_17
TsaE
DPPIV_N
AAA_29
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QOD86552
LinkDB
All DBs
Position
565671..568166
Genome browser
AA seq
831 aa
AA seq
DB search
MANQLNDATNEKPQLVGSVENIVFAAQDSFYKVLAVRVESANFEFDDEEMTVTGSFGDIQ
IGGDYTFTGRITTHARYGEQFLAENYQREAITSAKGVIDYLSGDRFPGVGKASATKIVDT
LGSDAIDKILDDAHVLDQLGLSEKVQATLVKRLEEADGVERTIIALNNFGFGSNLANDIY
EKYQAKTLQVLKENPYQLVADINGVSFKRVDQIAAEQGIEPDDQRRIEAAVLTTINRATF
ESGDTYILLNQLLQEAQRMLEQGQSEPVPVAAIQTALLKLTEQGDVVAEADHLYLQSVYQ
AEKDIADKLIRLTRMKTAKFERATVVKKVAAVAKQNDFAYDENQTDAIISALTSHLFILT
GGPGTGKTTILNGIVKTFRLLAQSEGMPADKITDSIMLAAPTGRAAKRLSEATQMPASTI
HRLLGITGRESARDLDVEELEGQLLIIDEMSMVDTELFALLLKAVPMGMQVILVGDKDQL
PSVGPGRVFYDILASGLLNYRELEVIYRQGKGSTIIELAQSVKQGQLPADFTMQKADRSY
FNASAQQVPQLIEKVASSWRDKGFSVADMQILSPMYKTPAGVHHLNKIAQNIFNPASPKK
REIAMNMGDNAYVLRVGDKVMQTTNDPENNVFNGDIGYIQTILLAKDKANTEKKDLVSVA
FDTGDVDYTRQDLNQLTLAYATTIHKAQGSEYKLVIMPMVRPFARMLQRNLLYTGITRAS
ESLVLLGEQSAFAQAAQTEGIMRHTTLQERLAQLSHGAPNKVATDQKSVDKPSQTVSVVE
AVNPNEANSQSATTKEAQAPKTTVLTAKLIANQEIDPNIGMDGLTPADFKR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaactgaatgatgcaacaaatgaaaaaccgcaacttgttggatcagttgag
aatatcgtttttgctgcacaagattctttttataaagtattagccgtccgcgttgaatca
gctaattttgagtttgatgatgaggaaatgacggtaacaggtagttttggagatattcaa
attggtggcgattatacgtttactggtcgtattacaacccatgcacgatatggtgaacag
tttctagcagaaaattatcaacgcgaagccattacttcagcgaagggtgtgattgattac
ttatcaggggatcggtttcctggggtaggtaaagcaagtgcgacaaaaattgttgacacc
ttaggttcagatgccattgataaaattttggatgatgcacatgttcttgatcagttggga
ctttcagaaaaggtccaagcgacccttgtaaaacgattggaagaggctgatggggttgag
cgaacgattattgcgctcaataactttgggtttggctctaatttggcaaacgacatttat
gaaaagtatcaagccaaaacgctgcaggtattgaaagaaaacccataccagctagtagca
gacattaacggcgttagtttcaaacgtgtggaccaaattgccgctgaacaagggattgaa
cctgatgatcaacgacgcatagaggcggcggttttaaccaccattaatcgagcgacattt
gaatcaggcgatacgtatattttgttgaaccaattgttgcaagaagcacagcgaatgctt
gaacaaggccagagtgaaccagttccggtcgcggcaattcaaacggcactactaaaatta
acggagcaaggtgatgtggtggctgaagctgaccatctgtatttacagtcagtttatcaa
gctgaaaaggatattgcggataaattgattcgcttgacgcgtatgaaaactgcgaaattc
gagcgggcaacggttgttaaaaaagtggcagcagtcgcgaagcaaaatgattttgcttac
gatgaaaatcaaacagatgcgattatatcagcactaaccagtcatttgtttatcttgaca
ggagggccgggaactggaaagacaactatcttaaatgggattgtcaagacgttccgttta
ctcgcgcaaagtgaaggtatgccagctgataaaataacagatagtattatgttagcggcg
ccaactggacgggccgcaaagcgcctctcagaagccacacaaatgcccgcatcaacaatt
catcgtttacttggcattacaggtcgagagtctgcacgtgatctggacgttgaagaactt
gaaggacaactattgattatcgatgagatgtctatggtcgatactgagttatttgcccta
cttttgaaagctgtaccgatggggatgcaggttattttagtgggtgataaagatcaatta
ccttccgttggaccagggcgtgttttttatgacattttagccagtgggctcttaaattat
cgcgaattagaggtgatttaccggcaaggtaaaggctcgacaattattgagttggctcag
tcggtgaagcaaggacaacttccagctgattttacgatgcaaaaagctgatcgatcgtat
tttaatgctagcgcccaacaagtgccacaactcattgaaaaagtggcaagttcatggcgg
gataagggtttttctgtagcggatatgcagattctttcacctatgtataaaaccccggcg
ggggtgcatcacttaaataaaatcgcccagaacatctttaatccagcaagtccaaaaaag
cgggaaattgcgatgaatatgggcgataatgcctacgtgttacgcgtgggtgataaagtc
atgcaaaccacgaatgaccctgaaaacaatgtgtttaatggtgatattggttacattcaa
acaattcttttagcgaaagataaggcaaatacggaaaagaaggatttggtcagcgttgct
ttcgatacaggtgatgtcgattatacgcggcaagacttgaatcaattaaccttagcctat
gcgaccacgattcataaagctcaggggtcagagtataaactagtcattatgcccatggta
cgtccatttgcacgcatgctgcaacggaatctgttatatacagggattacccgagcgagt
gaatcactggtcttgcttggtgagcagtcagcttttgcacaggcggcgcagaccgaaggt
attatgcggcataccacgttacaggaacggttggcacaactaagtcacggtgcacctaat
aaagtggcaactgatcaaaaatcagttgataaaccaagccaaactgtatcggtagtggaa
gcagttaacccaaatgaagcaaattcacaaagtgcgacgaccaaagaagctcaagcaccg
aaaacaacggttttaactgctaaattaattgcaaatcaagaaattgacccaaacattggc
atggatggcttgacaccagctgattttaagcgttaa
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