Weissella viridescens: IE337_03395
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Entry
IE337_03395 CDS
T06991
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wvr
Weissella viridescens
Brite
KEGG Orthology (KO) [BR:
wvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wvr03019
]
IE337_03395
03009 Ribosome biogenesis [BR:
wvr03009
]
IE337_03395
Enzymes [BR:
wvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IE337_03395
Messenger RNA biogenesis [BR:
wvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IE337_03395
Ribosome biogenesis [BR:
wvr03009
]
Prokaryotic type
rRNA helicases
IE337_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_RecD
CMS1
Mito_fiss_Elm1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QOD86645
UniProt:
A0A7L8CIC7
LinkDB
All DBs
Position
672296..673645
Genome browser
AA seq
449 aa
AA seq
DB search
MANFNDYHLRDEIYRALDAIHFNDPTPVQARLIPVILQGRSVVGQSQTGSGKTHAFLLPI
FQKLDVKKQQVQAVITTPSRELAQQIYQASKQIADQFPEDEQPRIGLFVGGTDKNRQIQQ
LKSNQPQIVIGTPGRIKDLYQSGALNIHTAHTLVVDEADMTLDMGFLNEVDAIAGAMPED
LQMLVFSATIPQKLQPFLKKYLNNPVVEEIPAETVISPTIQNVLMDTKGKAKDELIFNLL
TMGNPYMALVFANTKERAHELARQLKERGLKVAEIHGGIQPRERRRTMQQIQHLDYQYVV
ATDLAARGIDIPGVSLVINDGIPNDLEFFVHRVGRTGRNGAEGTAITLYSPDEDAKVTEV
ENMGVKFEPMVLSKGELKAVADRRRRTQRTKSTKKLDPTMIGMVKKKKKNVKPGYKHRIK
SEIARDAAYKKRVEDRQQQRATRKSRKSK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctaattttaatgactatcatttgcgtgatgaaatttatcgcgcgcttgatgccatc
cactttaatgatccaacgccagttcaagcccggttaattccggtgattttacagggacga
tcagtggttggacaatcacaaacaggatcaggaaagacgcacgcctttttgctacctatt
ttccaaaagcttgacgtcaaaaagcaacaagtccaagccgtgattacaacaccttcacgt
gaattggcccaacaaatttaccaagcttcaaagcaaattgcggatcaattccccgaagat
gaacagccacgtattggattatttgttggtggaactgataagaatcgtcaaatccaacaa
ttaaagtcgaaccaaccacaaatcgttattggaactcctggtcgaattaaagatttgtat
caaagtggtgcattgaatattcatacagcacataccttagtggtcgatgaagctgatatg
actttggatatgggattcttgaatgaagttgacgcaattgccggagcgatgccagaagac
ttgcaaatgcttgtcttctcagcaacaattcctcaaaagttacaaccatttttgaagaag
tatcttaacaatcctgttgttgaagaaattccagctgaaacagttatttctccaaccatt
caaaatgtcttaatggataccaagggtaaggcaaaggatgaattaatttttaatttgcta
acaatgggaaatccatacatggctttagtgttcgcgaatacgaaagaacgcgcccatgaa
cttgcacgccaattgaaggaacgtggtctcaaggttgctgaaattcatggtggcattcaa
ccacgtgaacgtcgacggaccatgcaacaaattcaacatcttgattatcaatatgtcgtt
gcaacagacttagctgctcggggaattgatatcccaggtgtttcgctggttattaatgat
ggtattccaaacgaccttgaattctttgtgcaccgtgttggacgtacgggacgtaatggg
gcagaagggactgccattaccttgtattctccagacgaagatgcaaaggtaaccgaagtc
gaaaacatgggagttaagtttgagccaatggttttgtctaagggagagctaaaagcagtt
gctgatcgtcgccgtcgaacgcaacgtaccaagtcaacaaagaaacttgatcccacgatg
attggtatggtcaagaagaagaagaagaatgtgaagcctggttataagcatcgtattaaa
agtgaaattgcacgtgacgcggcttataaaaagcgagttgaagatcgtcaacaacaacgt
gcaacacgtaaatcacgtaagtcaaaataa
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