Weissella viridescens: IE337_05390
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Entry
IE337_05390 CDS
T06991
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wvr
Weissella viridescens
Pathway
wvr03410
Base excision repair
wvr03430
Mismatch repair
wvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IE337_05390 (recJ)
03430 Mismatch repair
IE337_05390 (recJ)
03440 Homologous recombination
IE337_05390 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wvr03400
]
IE337_05390 (recJ)
DNA repair and recombination proteins [BR:
wvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IE337_05390 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IE337_05390 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IE337_05390 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QOD85636
LinkDB
All DBs
Position
complement(1090798..1093110)
Genome browser
AA seq
770 aa
AA seq
DB search
MIESKYAWQLVAPDDQLVKTLENDYQLPNLVAKYVVNQGLKTPEEIQAFLQPGMEALYDP
AELAGMDAAIARLMQAIESGESIVVYGDYDVDGMTSTAIMFWALEIMGAQVDYFVPSRFE
QGYGPNLAKYQELAANGMQLLVTVDNGVTGADEIAWLKSQGIDTIVTDHHELPEQLPDAV
AVVHPRLPREAPSYPFGDLSGAGVAFKVASALLEAPADEVIDLAALGTVADIMPLVDENR
IIVAQGLMAMREDARPGVAAILSIAGKNPEDLDAMSIGFTIGPRLNAIGRLDNPMLGVQL
LLSDEPEEAETLAQQVETLNQERQMLVEDVTNAATQMLTDQATTHAVNVVVGEGWHEGVL
GIVASRLVDATGKPSIVLSSDGTQAKGSARSIDGFDLFTPLDQHRELFTAFGGHAGAAGM
TLPLDNVGQLQKVLDEAAVAQNLSEKGKADLSILSQMDGSDFNRETFETLQMLGPFGEGN
PEPIFEINVSAVQQVKTMSDGKHLRFTAVTDQGNLPVIGFGFGATADQLQGHFQTIKLVG
AMSENVYRGMTTYQLMLKDLQAEGSSIMDWRTTKLTRQLLQQNADYIFFNKKNYDQLAGQ
VGANGRAIFIDDAYNYTQLGTLALVDLPNSLDELGELLNFVPAQAIAPIFYTKTPTYLQK
VPDKADFGKVFRFVQSFQNVNLSGQFKQVANHLQMDQSMLNLIFKVFLEANFVTIENGFL
NPVTNPSTVDLTETKAYKAFMKRRELEKQLIYSSTAELETLLSDLSNQEK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatcgaagtatgcatggcaactggtggctccggatgaccagctcgttaagacg
ttggaaaacgactatcaactgccaaatttagtggctaaatatgttgtaaaccaaggttta
aaaaccccagaagaaattcaagcctttttgcaaccaggtatggaagctttgtatgatcct
gcagaactagcagggatggatgcggcaattgcacgtttaatgcaggcgattgaatctggt
gaaagtattgtggtttatggagactacgatgtggatggtatgaccagtaccgcaattatg
ttttgggcccttgaaattatgggtgctcaagttgattactttgtaccaagccgttttgaa
caagggtacggaccaaacttagcgaagtatcaagaacttgccgctaatgggatgcaactc
ttagtaaccgtcgacaacggcgtgacgggagcagatgagattgcgtggctgaagtcacag
gggatagacacgattgtaacggaccatcatgagttaccggaacaacttcccgacgcagtg
gcggtcgttcatccgcgcttaccacgtgaggcaccaagctatccctttggtgacctttca
ggagccggggtggcctttaaagttgcgtcagcattgcttgaagcaccagcagatgaagtt
attgacctagctgcgcttggtacggttgcggatattatgccgctcgttgatgaaaatcgt
atcattgttgcgcaaggtcttatggcgatgcgggaagatgcacgcccaggcgttgcagca
atcttgtctattgctggaaaaaatccagaagacttagatgcaatgagtattggctttaca
attggaccacgcttaaatgcgattgggcggttagacaatccgatgctgggggttcagttg
ttattaagtgatgaacctgaggaggctgaaacgttggcccaacaggttgaaacactcaat
caagagcgtcaaatgctggtcgaagatgttacaaacgctgcgactcaaatgttaacagat
caggcaacgacgcatgcggtaaatgtcgtagtgggcgaaggttggcatgagggtgttctc
ggtattgtagcaagtcgattagttgatgcgactggcaaaccatccatcgtattatcgagt
gatggcacacaagctaaaggatctgctcgttccattgatgggtttgatttgtttacgccg
ttggatcaacatcgggaacttttcactgctttcggtgggcatgccggtgcagctggtatg
acgttaccgcttgacaatgttgggcaattacaaaaagtcctagatgaagcggcggttgcc
caaaatctttcagaaaaaggcaaagcagatctctcgattctctcgcaaatggatggaagc
gattttaatcgagaaacattcgagacgcttcaaatgctcggaccattcggtgaaggaaat
ccagaaccgatttttgaaattaatgtgagtgccgttcaacaggtgaaaacgatgtcggat
gggaaacatctccgtttcacagcggtgactgatcaggggaatttacccgttattggcttt
ggttttggagcgactgctgaccaactacagggtcatttccaaacaattaaacttgttggt
gcgatgagtgagaacgtttatcgtgggatgacaacgtaccagctcatgttgaaggacttg
caagcggaaggctcttcaatcatggattggcgaacaactaagttaacccgtcaacttttg
caacaaaatgcagattatatcttttttaataagaagaattacgatcaattggccggtcag
gtcggtgcgaatggacgggctatctttattgatgatgcctacaattatacgcagcttggt
accttagccttggtcgatttacctaattcattggatgagttgggtgaattactgaatttt
gtgccggcgcaggcaattgcgccaattttttataccaaaacaccgacatacctacaaaaa
gtacctgataaagctgattttggtaaggtgttccgatttgtacaatcgttccaaaatgtg
aatttgtctggtcaatttaaacaggttgccaatcatttacaaatggaccaaagtatgttg
aatttaatatttaaggtgtttttagaagctaactttgttacaatagaaaatggttttttg
aatcctgttacaaaccctagtacggtagatttaacggaaacgaaggcctataaggcgttt
atgaagcgtcgtgaacttgaaaagcaacttatttatagttcgacggcagaacttgagacg
ttactttcagatttgagtaatcaggagaaataa
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