Weissella viridescens: IE337_05505
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Entry
IE337_05505 CDS
T06991
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wvr
Weissella viridescens
Pathway
wvr03420
Nucleotide excision repair
wvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IE337_05505
03430 Mismatch repair
IE337_05505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wvr03400
]
IE337_05505
Enzymes [BR:
wvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IE337_05505
DNA repair and recombination proteins [BR:
wvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IE337_05505
MMR (mismatch excision repair)
Other MMR factors
IE337_05505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
UvrD_C
PhoH
AAA_30
DEAD
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
QOD85658
LinkDB
All DBs
Position
complement(1113701..1115986)
Genome browser
AA seq
761 aa
AA seq
DB search
MLEPYKSEQHRLDGVLEKIQDAKVANELERDNADKKKADVDAGWKDVRYRSSTYSGLFET
AMSVRQQQQMLEQREAEMNSVEHQAEVLEHLKERPYFARIDVQDAGSDVTEPIYIGLASF
SDEPDHFLIYDWRAPISSIYYDDGVGEVTYTTPAGDQQATVHLKRQFQIEDGKIETIFDT
DEAVGDQMLLNALSGESTTKMQSIVTTIQREQNKIIRNTSADLLFVQGAAGSGKTSAVLQ
RVAYLLYRYRGQLTSGQVVMFSPNQLFNDYIDQVLPELGEQNMVQMTYYQYASRRLPRFE
LETLQERFEAQPGTVQKELIDLKGTLDYFNVMQTYAKGLNQKGIQVRPIKFRGEEVISAD
RIKEIYYSFNENYNLGNRLFATKERLLKMLQSHVRSEMNAEWVDEQIENLSKEEYDSMMG
DQEKEFKSDKEEHNYIAKIIVTNEMAPIIRGINRNRFININRQFVHFLKSVPYLMDLTQY
QLTQADWDAGVEATVAQMQQGKLSLADMTPFMLLFDLIKGTHGERDIRFLFIDEIQDYTP
FQLAFLKRSFPKARFTMLGDLNQAIFTKENAAGLQADLTHLFNPEKSEYIELTDTYRSTQ
QITDYAKAILVDGATINAFEREGDKPSVKVTQNETEMIDAAVAKVNQANDAHETTAIITK
TLADAEEAYAQLRDQLDVTIIRTENQRLVPGTIIVPAYLAKGLEFDAVIMWDANAEKYHA
EDERQLVYTIASRAMHQLTVLADQKLSPLLSDIDESLYVKE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaccttataaatctgaacaacatcgcttagatggtgtattagaaaaaattcag
gacgcaaaagttgccaatgaattagaacgagacaatgctgataaaaagaaggctgacgtc
gatgcaggatggaaagatgtgcgctatcgttcatcgacttacagtggtctttttgaaacc
gctatgtcggtgcgtcaacagcaacaaatgctcgaacagcgtgaggctgagatgaactcg
gttgaacaccaagctgaggttctagaacatttgaaagagcgaccttattttgcacgaatt
gatgtgcaagatgcaggttctgatgtaactgagccgatttatattgggttggcgtcattt
tcagatgaaccagatcatttcttgatctatgactggcgtgcgccaatttcatcgatttac
tatgacgatggtgtgggtgaagtgacatatacgacaccagctggtgaccaacaagcaact
gtccacctcaaacgacaattccaaattgaggatggtaaaattgaaactatctttgatacc
gatgaggccgttggtgaccaaatgctcttgaatgcattatctggtgaatcaaccacgaaa
atgcagtcaatcgttacaacgattcaacgtgaacaaaataaaattatccgaaatacttct
gcggatttgttatttgtacaaggtgcagcaggatctggtaaaacttcagctgtcttacag
cgggtagcttacttgttgtatcgatatcgtggtcaactaacatcaggtcaagtcgtgatg
ttttcaccaaaccaactatttaatgactacattgatcaagtcttacctgaacttggtgaa
caaaacatggttcagatgacttattatcaatatgcttcacgacgcttaccacgatttgaa
ttggaaactttgcaagaaagatttgaagctcaacctgggactgttcaaaaagagttgatt
gatttgaagggaactttggattacttcaatgtgatgcaaacgtatgctaaaggtttgaat
caaaagggaattcaagtgcgtccaattaaatttagaggcgaagaagtgattagtgcggat
cgcattaaggaaatctattatagtttcaatgaaaactataatctaggaaaccgtctcttt
gcgacaaaggaacgcctacttaaaatgttgcagtcacatgtgcgttcagaaatgaatgct
gaatgggttgatgagcaaattgaaaatctatctaaagaagaatatgattcaatgatgggt
gatcaagaaaaagaatttaagtcagataaagaagagcacaattacatcgcgaaaattatt
gtgacgaatgaaatggcaccaattattcgtggtattaatcgtaatcgtttcattaatatc
aatcgccaattcgtccactttttgaagagtgtgccttatttgatggatttgacgcaatac
cagcttactcaagctgattgggatgccggagtagaggcaacggttgctcaaatgcaacaa
ggcaaattgagcttagcagatatgacaccatttatgttgttgtttgatttaattaaagga
acacatggtgaacgtgatattcgcttcttgtttattgatgagattcaagactacacacca
ttccaattagccttcttgaagcgtagttttccaaaggcacgatttacaatgttgggtgat
ttaaatcaagccatctttactaaagaaaatgcagctggcttacaagccgatttgacacat
ttgtttaatccagaaaagtcagagtacattgagttgaccgatacttatcgttcaacacag
caaattacggattatgcaaaagctattttagttgatggtgcaacgattaatgcctttgaa
cgcgagggtgataaaccaagtgtcaaagtgacgcagaatgaaactgaaatgattgatgcg
gctgttgctaaagttaatcaagccaatgatgcacacgaaacaacggcgattatcacaaag
accttagctgacgccgaggaggcctatgcacaattgcgtgatcagttagacgtcacaatc
atcagaactgaaaatcaacgcctagttccaggtacaatcattgtgccagcctatcttgcc
aaagggttggaatttgatgcggttattatgtgggacgccaacgcagagaaataccatgct
gaggatgaacgtcaattggtttatacaatcgcctcacgtgcaatgcaccagttaactgta
ctagctgatcaaaagttgtcacccttgttaagcgatattgatgagagtttatatgtgaag
gaataa
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