Weissella viridescens: IE337_05550
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Entry
IE337_05550 CDS
T06991
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
wvr
Weissella viridescens
Brite
KEGG Orthology (KO) [BR:
wvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wvr03019
]
IE337_05550
Messenger RNA biogenesis [BR:
wvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IE337_05550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
HDOD
tRNA_anti-codon
TMEM72
Motif
Other DBs
NCBI-ProteinID:
QOD85667
LinkDB
All DBs
Position
complement(1125314..1126270)
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AA seq
318 aa
AA seq
DB search
MLKDYENNEQFEANVLLNDIDVRRTQQGKAYLNLLVSDRSMEISAKKWDVTDAEMKEFVA
GEVIHIKAIRQTYKDQPQLRVLEMRKTEPGEPNDPTDFMQTAPVKKEGLEEEVSQIMFQI
TNATWQRVVRYLFKKYHEEFFSFPAAKSNHHAFKGGLAYHSLSIVHLAQAVTEQYENING
SLLYAGGLLHDLGKVIELTGPVATKYTTASNLIGHITLIDEQIVLAAHELKLDLNSEDML
VLRHTVLAHHGQLDYGSPVRPQIKEANILHQLDELDANIQSFDQALAQTEPGEFSSPQFA
LDRRRVYRPRQENQSEDL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaagattatgaaaataacgaacaatttgaagccaatgtgcttttgaatgatatc
gatgtgcgtcgtacgcaacaaggaaaagcgtacctaaatttattggtttcagatcgttcg
atggaaattagtgcaaaaaaatgggatgtgactgacgctgaaatgaaggaatttgtggct
ggtgaagtgattcatattaaagccattcgacaaacatataaggaccagccgcaattacgt
gttttggaaatgcgtaaaacagagccaggtgagccaaatgatccaacagactttatgcaa
acagcgccagttaaaaaagagggccttgaagaagaagtcagccagattatgttccaaata
actaatgccacgtggcaacgcgtggtacggtacttatttaaaaaataccacgaggagttc
tttagttttccagctgctaaatcaaaccaccacgcttttaaggggggattggcttaccat
tcactttcaattgttcatttagcgcaagctgtcactgaacaatatgaaaatattaatggg
agtctcttatatgcaggtggccttttacatgatttaggtaaagtcatcgaattaacagga
ccagttgccacaaagtatacaacagccagtaatctaatcggacacattacattaattgat
gaacaaattgttttggcggcacatgagttaaaacttgatttgaattctgaagatatgttg
gtgttacgtcacacggtgttagctcatcatggacaattggactatggttctcccgtacga
ccacaaattaaagaagctaatattttgcaccaacttgatgagttagatgcaaatattcaa
tcattcgatcaagccctagcacaaactgaaccgggagagttttctagtccacagtttgca
cttgaccgacgccgggtctatcgaccacgacaagaaaatcagtcagaggacctataa
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