Candidate division WWE3 bacterium RAAC2_WWE3_1: P147_WWE3C01G0054
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Entry
P147_WWE3C01G0054 CDS
T02947
Name
(GenBank) hypothetical protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
wwe
Candidate division WWE3 bacterium RAAC2_WWE3_1
Pathway
wwe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wwe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P147_WWE3C01G0054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wwe03021
]
P147_WWE3C01G0054
03400 DNA repair and recombination proteins [BR:
wwe03400
]
P147_WWE3C01G0054
Enzymes [BR:
wwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P147_WWE3C01G0054
Transcription machinery [BR:
wwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P147_WWE3C01G0054
DNA repair and recombination proteins [BR:
wwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P147_WWE3C01G0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
FlgK_D1
Motif
Other DBs
NCBI-ProteinID:
AHB40001
LinkDB
All DBs
Position
58930..62598
Genome browser
AA seq
1222 aa
AA seq
DB search
MKDISQLKDFDAIKIYLASSQELLSWSYGEVTKPETINYRTFKPEREGLFDERIFGPSKN
YECYCGKYKGIRYKGVLCDKCGVEVTHSRVRRERMGHIKLSSPVAHVWFFKGIPSKMALL
LDLTPRNVESVVYFASFIVTAMDGKKKAEAIDMVTKDFEKVKAQINKEADAKVQEVEVEL
KNIAKIPEEIKRAEEERKIREKTQQIRTQYEKKIEEQEKHFKIVQKKIESVEQYSVISEN
EYIQLVNYLEIFAQLEIGAEALQNILKSMNLNDLSEKLRLDLTTSKGQKAQRINKRLKVV
EQFRKANISPDRMIMEIIPVIPPDLRPMVQLEGGRFASSDLNDLYRRLINRNNRLGRLLD
LGAPEIIVRNEKRMLQESVDALFDASKQRQKTRVTRGKKELRSLADMIKGKQGIFRLNLL
GKRVDYSGRGVIINGPNLKLNECGLPKDMALELFKPMVLREILGRGYAPNVKSAKYYLES
RVPEVWDILEEVVKDHPVLLNRAPTLWRLGIQAFYPKLVEGNSIKLHLCVCSGYNADFDG
DQMAVHVPLGEKAIEEAKTVMISTNNLLNPSNGSPISIPTKIMLFGVYYITSVDEKLPLF
ERVFSDEYELMHAVDATGEVTLRQKIKIGINGEIVETTYGRLIFNRVVPERFGYVNHTMD
KKQINSILQRTFETEPNEVVVKFIDDLKDLGLKYGTISGQSVSLSDIQVPQARVSIITKG
KETVAEIESNYKRGLITRAEASRLKEDTWNKVISDLDAAIWDALADDNPVKVLVKSGSTR
ASRDQVKQVAGMKGLVVDTSGKTVEVPILGNYKYGLSALEYFIGAKGARKGLVDKGLKTA
DAGYLTRRLVDVSQDVIVRVEDCGTEHGRTMKVGEGTLLQTFADRVIGRYLASDVKVKGK
TLVKRGTLLSREDVAKIEAAGIENIVIRSPMHCETRRGICGKCYGKDLMTGKLVNMGTAV
GVAAAQSIGEPGTQLSMRTFHTGGIAGKDITQGLPRVEELVEARAPKFLSLMSDITGVVN
IVKSGDERKIIVIPTDRDEDAAEYLVDPVEEIIVKEGEIVAKGEKLTAGNLDLTDLFRTV
GVDETKRYIIEEIQKVYASQGVALNDKHIEIIVKQMFNHVKIDEVGDTEFMEGELSTKAR
FMEVNEEVIASGGTPATGKLTMLGITRASLNTDSFLSAASFIQTSNVLTDAAASGKVDYL
LGLKENVIIGRLIPTGDRARLE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacattagtcaattaaaagattttgacgcaataaaaatatatctggcatcaagt
caggaattattgagctggtcgtacggagaggttacaaaacccgagaccataaactacagg
actttcaaacccgaaagagaaggacttttcgatgagcgcatcttcggtccttccaaaaat
tacgaatgctattgcggaaagtacaaaggaataaggtacaaaggtgttttgtgtgataag
tgcggtgtcgaggtaacacattccagagtgagaagagaaagaatgggacatataaaactt
tcctctccggtagctcacgtttggttcttcaaaggcattccgtcaaagatggctctattg
cttgatctcacaccgaggaacgtggaatcggtggtctatttcgcgtcattcatagttacg
gccatggacggcaagaaaaaggctgaagcgatagatatggtcacaaaagatttcgaaaaa
gttaaagctcagataaataaggaggccgatgcaaaagtgcaggaggtagaagttgagctg
aagaatattgcaaaaattcccgaagaaataaaacgcgccgaagaggaaaggaagattaga
gaaaagactcagcaaataaggacacagtacgaaaaaaagatagaggagcaggaaaaacat
ttcaagatagttcaaaagaaaattgaaagtgtcgaacagtactcggtcatatccgagaac
gaatatatacaattggtaaattatctcgaaatattcgctcagttggaaatcggagcagaa
gctttacagaatatattaaaaagcatgaatcttaacgatctctcggaaaaactcagattg
gatctgactacttccaagggacagaaggctcaaagaataaacaaaagacttaaagttgta
gaacagttcaggaaggcgaacatctcccccgatagaatgattatggaaataattccggtg
atacccccggatcttagacctatggttcagttggagggcggacgatttgcaagttccgac
ttgaatgatctttacagacgattgattaatagaaataaccgtttgggcaggctgctggat
ttgggtgcccccgaaatcattgtaaggaacgaaaaaagaatgctgcaggaatcagttgac
gcactttttgacgcttccaaacaaagacaaaaaacaagagttaccagaggtaaaaaggaa
ttgaggtccctggccgatatgataaagggtaagcagggcatattccgtttgaacctgttg
ggaaaaagggtcgattactcaggaagaggcgttatcataaacggtcccaatttaaaattg
aacgaatgcggacttcctaaagacatggctcttgaactattcaaacccatggttctgagg
gaaatacttgggagagggtatgcacctaatgtaaaaagtgcgaaatactatcttgaatca
cgcgtgcctgaggtttgggatattcttgaggaagtagtcaaggatcatccggttcttctg
aaccgtgcacctactctctggaggctgggtattcaggcattctatccgaagttggtagaa
ggtaactcaataaaacttcatctgtgtgtatgctcaggctataacgctgactttgacgga
gaccaaatggcagttcatgttccgttgggtgaaaaagctatagaagaggccaaaacagtg
atgatatccaccaacaatttgctgaatccttcgaacggatctccaatttcaatacccaca
aaaataatgttgtttggggtttactacatcacatccgttgatgagaaacttccgttgttc
gaaagagttttcagtgacgaatacgaacttatgcatgcggtcgatgctaccggagaagta
actttacgacaaaagataaaaatagggattaacggcgagattgtagaaactacgtacggt
agactcatattcaacagggttgttccggaaaggtttgggtatgtcaatcatacaatggat
aagaaacagattaactcaatcctacagagaactttcgaaacggaaccaaacgaggtagtt
gttaaattcattgatgaccttaaggatctcgggctaaagtacggaaccatcagcggtcag
tcggtttccctgtctgatattcaggttcctcaggcaagagtttcaattataactaaagga
aaagaaacggtagccgaaatcgagtctaactacaaaaggggcttgattacaagggctgag
gcttcaagacttaaagaagatacatggaataaagtgatttccgaccttgacgcggcaatt
tgggatgcgttggccgacgataacccggttaaggttttggtcaaatcaggttcaacacgt
gcttcaagggatcaggttaaacaagttgcgggtatgaaaggtttggtcgttgatacatct
ggtaagacggttgaagttcctattcttggcaactataaatacggattatcggctttggag
tacttcatcggagctaaaggtgcgagaaaaggattggtggacaagggtttgaagacagct
gacgccggctacttgaccagaagacttgtggatgtttcacaggatgttatcgttcgcgtc
gaagattgtggtacagagcacggtaggacaatgaaagtaggggaaggaaccttacttcaa
acttttgcagacagagtgataggacgctatcttgcttcggacgtgaaagttaaaggaaag
accctggtaaaaagaggtacgttgctttcgcgcgaagacgtggcaaaaatagaggctgca
ggcatcgaaaacattgttatcaggtcccccatgcactgtgaaaccagaagaggtatctgc
ggtaagtgctacggaaaagatctgatgacgggaaaacttgtaaacatggggactgcagta
ggtgtcgcagcggctcaatccatcggtgagccgggcactcagctctccatgagaaccttt
cacaccggaggtattgcaggaaaagatattacccagggtttgcccagagttgaagaactg
gtcgaggcaagagcacctaaattcctttctttaatgtcggatattacaggtgttgtaaac
atagtcaaaagcggtgacgaaagaaagatcattgttatccccacggaccgtgatgaggac
gccgccgaatatttggtggatccggtcgaagaaataatagtcaaggaaggtgaaattgtc
gcaaaaggcgaaaagttaactgcaggcaacctcgatcttactgacctgttcagaaccgta
ggagttgatgagaccaagagatacataattgaggaaatccagaaagtttatgcttcccag
ggtgttgccctaaatgataagcacatcgaaataatcgttaaacaaatgttcaatcacgtg
aaaatcgatgaggtcggggacacagagtttatggaaggcgaacttagtaccaaagccaga
ttcatggaagtaaacgaggaagttattgccagtggcggaacccccgcgacagggaaactt
accatgcttggaattaccagagcttcgttaaacacggacagtttcttatctgcagcttca
tttattcagacaagtaatgtgttgaccgacgcagcagcttctggtaaggttgattatctt
ttgggattgaaagaaaatgtcataattggtagattaatcccgacaggagatcgtgccaga
ttggagtaa
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