KEGG   Xanthomonas sp. CFBP 8445: NUG21_00170
Entry
NUG21_00170       CDS       T11515                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
xab  Xanthomonas sp. CFBP 8445
Pathway
xab03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    NUG21_00170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xab03400]
    NUG21_00170
DNA repair and recombination proteins [BR:xab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     NUG21_00170
SSDB
Motif
Pfam: Ku DUF1839
Other DBs
NCBI-ProteinID: UYC12207
LinkDB
Position
34865..35842
AA seq 325 aa
MPRPIWTGTLSFGLLNVPVSLMSGERRVDLHFRMLDARDKRPIRFERVNADTGEEVPWKD
IVKAYEYSKGNYVVVEQQDIASAAPESHEAVEVEAFVDAAEIDLRYFEKPYVLVPGKKAE
KGYVLLRETLRSTGKVGIARVVIRTREYLSAVMPLQDALVLILLRYPQELVDLDDYTLPS
GKAADYRISAKETEMAAQLIDSMSGRWDPDAYHDEFRERLHAVIQKRIKAQEGTTQVDED
AEAPHREDAATNVVDFMSLLQKSLEAKKRTPARQDERVPVRKTAKKASKPAKAASGKAKK
ATRAKPAAAKAKPAARKAPARRKAG
NT seq 978 nt   +upstreamnt  +downstreamnt
atgccgcgcccgatctggaccggcacgctgtccttcggcctgctcaacgtgccggtgtcg
ctgatgtccggcgaacgccgggtcgatctgcacttccgcatgctcgacgcgcgcgacaag
cgcccgatccgcttcgagcgggtcaatgccgacaccggcgaggaagtgccgtggaaggac
atcgtcaaggcctacgaatacagcaagggcaactacgtggtggtcgagcagcaggacatc
gcctcggccgcgccggagagccatgaggcggtggaggtggaagccttcgtcgacgccgcc
gagatcgacctgcgctacttcgaaaagccctacgtgctggtgccgggcaagaaggccgag
aagggctatgtgctgctgcgcgagacgctgcgcagcaccggcaaggtcggcatcgcgcgg
gtggtgatccgcacccgcgaatacctgtcggcggtgatgccgctgcaggatgcgctggtg
ctgatcctgctgcgctatccgcaggaactggtcgacctggacgactacacgctgcccagc
ggcaaggccgccgactaccggatcagcgccaaggaaaccgagatggcggcgcagctgatc
gactcgatgtccgggcgctgggatcccgatgcctaccacgacgaattccgcgagcggctg
cacgcggtgatccagaagcggatcaaggcgcaggagggcaccacccaggtcgacgaggac
gccgaggccccgcaccgcgaggatgccgccaccaacgtggtcgacttcatgtcgctgctg
cagaagagcctggaggccaagaagcgcacgcctgccaggcaggacgagcgtgtgcccgtg
cgcaagaccgccaaaaaggccagcaagccggccaaggcggcgtccggcaaggcgaagaaa
gccacgcgcgcgaaaccggcggcagccaaggccaagccggccgcacgcaaggcgccggcg
cggcgcaaggcgggctag

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