Xanthomonas sp. CFBP 8445: NUG21_00170
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Entry
NUG21_00170 CDS
T11515
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
xab Xanthomonas sp. CFBP 8445
Pathway
xab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NUG21_00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xab03400
]
NUG21_00170
DNA repair and recombination proteins [BR:
xab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NUG21_00170
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Ortholog
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GFIT
Motif
Pfam:
Ku
DUF1839
Motif
Other DBs
NCBI-ProteinID:
UYC12207
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All DBs
Position
34865..35842
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AA seq
325 aa
AA seq
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MPRPIWTGTLSFGLLNVPVSLMSGERRVDLHFRMLDARDKRPIRFERVNADTGEEVPWKD
IVKAYEYSKGNYVVVEQQDIASAAPESHEAVEVEAFVDAAEIDLRYFEKPYVLVPGKKAE
KGYVLLRETLRSTGKVGIARVVIRTREYLSAVMPLQDALVLILLRYPQELVDLDDYTLPS
GKAADYRISAKETEMAAQLIDSMSGRWDPDAYHDEFRERLHAVIQKRIKAQEGTTQVDED
AEAPHREDAATNVVDFMSLLQKSLEAKKRTPARQDERVPVRKTAKKASKPAKAASGKAKK
ATRAKPAAAKAKPAARKAPARRKAG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcccgatctggaccggcacgctgtccttcggcctgctcaacgtgccggtgtcg
ctgatgtccggcgaacgccgggtcgatctgcacttccgcatgctcgacgcgcgcgacaag
cgcccgatccgcttcgagcgggtcaatgccgacaccggcgaggaagtgccgtggaaggac
atcgtcaaggcctacgaatacagcaagggcaactacgtggtggtcgagcagcaggacatc
gcctcggccgcgccggagagccatgaggcggtggaggtggaagccttcgtcgacgccgcc
gagatcgacctgcgctacttcgaaaagccctacgtgctggtgccgggcaagaaggccgag
aagggctatgtgctgctgcgcgagacgctgcgcagcaccggcaaggtcggcatcgcgcgg
gtggtgatccgcacccgcgaatacctgtcggcggtgatgccgctgcaggatgcgctggtg
ctgatcctgctgcgctatccgcaggaactggtcgacctggacgactacacgctgcccagc
ggcaaggccgccgactaccggatcagcgccaaggaaaccgagatggcggcgcagctgatc
gactcgatgtccgggcgctgggatcccgatgcctaccacgacgaattccgcgagcggctg
cacgcggtgatccagaagcggatcaaggcgcaggagggcaccacccaggtcgacgaggac
gccgaggccccgcaccgcgaggatgccgccaccaacgtggtcgacttcatgtcgctgctg
cagaagagcctggaggccaagaagcgcacgcctgccaggcaggacgagcgtgtgcccgtg
cgcaagaccgccaaaaaggccagcaagccggccaaggcggcgtccggcaaggcgaagaaa
gccacgcgcgcgaaaccggcggcagccaaggccaagccggccgcacgcaaggcgccggcg
cggcgcaaggcgggctag
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