Xanthomonas sp. CFBP 8445: NUG21_00820
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Entry
NUG21_00820 CDS
T11515
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xab Xanthomonas sp. CFBP 8445
Pathway
xab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NUG21_00820 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xab03400
]
NUG21_00820 (recD)
Enzymes [BR:
xab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NUG21_00820 (recD)
DNA repair and recombination proteins [BR:
xab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NUG21_00820 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
SH3_13
NAT10_TcmA_helicase
T2SSE
UvrD_C
DEAD
Herpes_Helicase
AAA_16
nSTAND3
SLFN-g3_helicase
AAA_28
Rad17
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UYC12332
LinkDB
All DBs
Position
170868..172871
Genome browser
AA seq
667 aa
AA seq
DB search
MSQPTNLLATLYRTGTLRTLDHAFAHSLARLDPDTPDLVLAGAALASLAVASGHAGLDPA
RASLLLDSRDAAPPALPTADDWTRALAASRWVAQPAAEDPASPDCPLVLEHGLLYLRRYR
EYERRLALGLRRLAVQPLPHSDLAALAPLFAQLFPLPPGEGARRAGEGPTANDPSDRQAQ
AAALALRRALLLVTGGPGTGKTTTIARLLLLRVAQARAAGLPPPRIALAAPTGRAAERMA
ESLRAAVARALADGVDPALAEALPAGASTLHRLLGVIPDLPRFRHDADNPLPFDLIVIDE
ASMVDLPLMCKLVDAVADGAQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQADDAQA
LQPLLGHGAVADDHGGLAGHRVHLLRGYRQAQDFALAPLADAVRSGDADGALRLLRDGQL
AGVHFHDGVDDALAAGGDALLAHWRALGATDDPAEALRAAARLRLLTAVRAGPQGARGLN
ARIEQLLAETASGARRLGAAAPWFHGRLLLITENSYRHGLFNGDVGICLRDAQGTLVAWF
DGAGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFEEVWLQLPARDARVLSRELVYTGIT
RARRALHIAASEAVLRAALARHAARISGLAWRLGGAEPSGDPPPPPRPPPPTPPAKDEPV
PSQGSLF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaacccaccaacctcctcgccaccctctaccgcaccggcaccctgcgcacgctg
gaccatgccttcgcgcacagcctggcccgcctcgacccggacacgcccgacctggtcctg
gccggcgccgccctggcctcgctggcggtcgccagcggccacgccggcctcgacccggca
cgcgccagcctcctgctcgacagccgcgatgccgctccgcccgcgctgcccaccgcggac
gactggacccgcgccctggccgcctcgcgctgggtcgcacaacccgctgccgaagacccc
gccagccccgactgcccactcgtactggaacacggcctgctgtacctgcgccgctaccgc
gagtacgagcgacgcctggccctgggcctgcgccgcctcgccgtgcagccgctgccgcac
agcgacctcgccgccctcgcacccctgttcgcccagcttttccctctccccccgggagag
ggtgcccgaagggcgggtgagggtccgaccgccaacgatccatcggaccgccaagcccaa
gccgccgcgctcgccttgcgccgcgcattgctgctggtcaccggcggccccggcaccggc
aagaccaccaccatcgcccgcctgctgctgctgcgcgtggcccaggcccgcgccgccggc
ctgccgccgccgcgcatcgccctggccgcgcccaccggccgcgccgccgagcgcatggcc
gagagcctgcgcgccgcggtggcgcgcgcgcttgccgacggcgtcgatccggccctggcc
gaggcgctgccggccggcgccagcaccctgcatcgcctgctcggcgtcatccccgacctg
ccgcgcttccgccacgacgccgacaacccgctgccgttcgacctgatcgtgatcgacgaa
gcctccatggtcgacctgccgctgatgtgcaagctggtcgacgccgtcgccgacggcgcg
caactgatcctgctcggcgacgccgaccagttgccctcggtggaagccggcgacgtgctc
gccgcgatcctgcaggccgccggccccggcgacgcgctgcaggccgacgacgcgcaagcg
ctgcagccgctgctcggccacggcgcggtcgcggacgaccacggtggcctggccggccac
cgcgtgcacctgctgcgcggctaccgccaggcccaggacttcgccctggcgccactggcc
gacgcggtccgcagcggcgatgccgacggcgccctgcgcctgctgcgcgacggccagctc
gccggcgtgcacttccacgacggcgtcgacgacgcgctcgccgccggcggcgacgccctg
ctcgcgcactggcgcgccctcggcgccaccgacgacccggccgaggccctgcgcgccgcc
gcgcgcctgcgcctgctcaccgccgtgcgcgccggcccgcagggcgcgcgcgggctcaac
gcgcgcatcgaacaactgctggccgagaccgccagcggcgcgcgccgcctcggcgccgcc
gcgccctggttccacggccgcctgctgctcatcaccgagaacagttaccgccacggcctg
ttcaatggcgacgtcggcatttgcttgcgcgacgcgcagggcaccctggtcgcctggttc
gacggcgccggcgacggccaggtccgcggcttccacccggccgcgctacccgcgcacgag
agcgccttcgccatgaccgtgcacaaggcccagggcagcgaattcgaggaggtgtggttg
caattgccggcccgcgacgcccgcgtgctcagccgcgaactggtctacaccggcatcacc
cgcgcccgccgcgcgctgcacatcgccgccagcgaagcggtgctgcgcgccgcgctggcc
cggcatgcggcgcggatctcggggctggcgtggcggttgggtggggcggagccgagtggc
gatccgccaccaccgccacggccaccaccgccaacgccgccagcgaaggatgagccggtc
cccagccagggctcgttgttctga
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