Xanthomonas sp. CFBP 8445: NUG21_07170
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Entry
NUG21_07170 CDS
T11515
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xab Xanthomonas sp. CFBP 8445
Pathway
xab03030
DNA replication
xab03430
Mismatch repair
xab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NUG21_07170 (dnaE)
03430 Mismatch repair
NUG21_07170 (dnaE)
03440 Homologous recombination
NUG21_07170 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xab03032
]
NUG21_07170 (dnaE)
03400 DNA repair and recombination proteins [BR:
xab03400
]
NUG21_07170 (dnaE)
Enzymes [BR:
xab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NUG21_07170 (dnaE)
DNA replication proteins [BR:
xab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NUG21_07170 (dnaE)
DNA repair and recombination proteins [BR:
xab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NUG21_07170 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UYC13509
LinkDB
All DBs
Position
complement(1708554..1712144)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFAHLHIHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLLIADGAQAPWRLTVLCRNRDGYLSLSRLLTRAWLEG
HRSEGGVALRPEWLQTGSDNLFALAGRESLAGRLASEGRHDLAEQQLADWQRIFGDGLHL
ELTRTGRDGEEAFNQFALHAAGTRGLPVIASNDVRFLYASDFAAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSAEEMAALFADIPDAIDNTLALAQRCNIEMQLGTYFLPAYPVPDDET
LDSWIRSQSRDGLAARLEKNPLAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNILGIT
LKDAMGEGKDSEMASPELIQRYQAEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPLS
DFCPLFAEHDVDNFGKNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIPPVEIAAIPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPSFNARKHGQEEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVGEAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVLPPRINASAYMFEA
ATPDTIQYGLGAIKGVGRGACEAIVAERERGGEYASLLDFCTRVESAKLNKRTLEAMINA
GAMDGLGSNRATLMLQLPEVMKATEQMARERASGQNSLFGGADTSAPALRLDLPESKEWP
LGQLLAGERETLGFYLSGHPFDPYRDEVRELVGCDLSALEKICAQSGGGRGGGGDGEKRA
WRPEVSAILAGQVVGVRRKGDSQVFVQLEDGRGRIECSAFSDAIAEFGHLLTRDRILIVK
GGVREDEFNGGYAMRIRQCWDYEQICTHHAQRLSLRLDLRQRSAWPRIDGLLARHRPGKT
PLRLDLLLQSAQGGIAGMLDLNGSHSVRVDPQLLDALRGDPAVRAVKVKYSPPWAN
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgcccatctgcacatccacaccgagttctcgctggcggattcg
accatccgtgtgcccgagaaaccggatcaggctgacccgaagaaagccaagcaggccaac
ctgctcagccgcgcagtggagctggacctgcctgcgctggcggtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgagggcgtgggcatcaagccgatcgcc
ggcgccgacctgctgatcgccgacggcgcccaggcgccgtggcggctgaccgtgctgtgc
cgcaaccgcgacggctacctgagcctgtcgcggctgctgacccgcgcctggctggaaggc
caccgcagcgaaggcggcgtggcgctgcgcccggaatggctgcagaccggcagcgacaac
ctgttcgcgctggccggccgcgagagcctggccgggcgcctggccagcgaaggccgccac
gacctggccgagcagcaactggccgactggcagcgcatcttcggcgacggcctgcacctg
gaactgacccgaaccggccgcgacggcgaggaggcgttcaaccagttcgccctgcacgcc
gccggcacccgcggcctgccggtgatcgccagcaacgacgtgcgtttcctgtacgccagc
gacttcgccgcgcacgaggcgcgcgtgtgcatctcctccggtcgcgtgctcgacgacccc
aagcgtccgcgcgactacagcgaccagcagtacctgaagtcggccgaggaaatggccgcg
ctgttcgccgacatccccgacgcgatcgacaatacgctggcgctggcgcaacgctgcaac
atcgagatgcagctgggcacctacttcctgcccgcctacccggtgcccgacgacgagacg
ctggacagctggatccgcagccagtcgcgcgacggcctggccgcgcgcctggaaaagaac
ccgctggcgcccggcaagacccgccaggactacgtggaccggctcgagttcgagctggac
accatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaatcagggcatcccgatcggcccgggccgcggctccggtgccggttcgctggtg
gcgtgggcgctgcagatcaccgacctggacccgctgccgtacaacctgctgttcgagcgc
ttcctcaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggatcgc
cgcgacgaggtgatcgactacgtggcgcgcaagtacggccgcgaccgggtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgactgcggccgcgtgctcggc
ttcccgtacggcctggtcgacggcgtcgccaagctgatccccaacatcctcggcatcacg
ctgaaggatgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatccag
cgctaccaggccgaggacgacgtccgcgacctgatggacctggcgcggcagctcgaggac
ctgacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgccgacgccgctgtcc
gacttctgcccgctgttcgccgaacacgacgtcgacaacttcggcaagaacccggtcacc
cagttcgacaaggacgacgtcgaacaggtcggcctggtcaagttcgacttcctcggcctg
cgcaccctgaccatcatcgactgggcggtgaaggcgatcaacgtgcgccacgcgcgcgcc
ggcatcccgccggtggagatcgccgcgatcccgctcgacgacgcgccgacctacaagggc
atcttcgcctcgggcaacacgggtgcggtgttccagttcgaatcctcgggcatgcgccgg
ctgctgaaggacgcccgccccgaccgcttcgaggacctcatcgcgctggtctcgctgtac
cgccccggcccgatggacctgatcccctcgttcaacgcgcgcaagcacggccaggaagag
atcgtctatcccgatccgcgcaccgaagcgatcctgaaggacacctacggcatcatggtg
taccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctgggcggcgcc
gacctgctgcgccgcgcgatgggcaagaaggtgccggcggaaatggccaagcaccgcgag
atcttccgcgagggtgcggccaagggcggcgtcggcgaggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcgtggctgaaacgccactaccccgccgagttcatggcggcc
acgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcgacgaggtgcgc
aacctcggcctgaccgtgctgccgccgcgcatcaacgcgtcggcctacatgttcgaggcg
gccacgccggacaccatccagtacggtctgggcgcgatcaagggcgtgggccgcggcgcc
tgcgaagcgatcgtggccgagcgcgagcgcggcggcgagtacgcctcgctgctggatttc
tgcacccgcgtggagtcggccaagctcaacaagcgcacgctggaagcgatgatcaacgcc
ggcgcgatggacgggctgggcagcaaccgcgccacgctgatgctgcagttgccggaggtg
atgaaggccaccgagcagatggcgcgcgagcgcgcctccggacagaactcgctgttcggc
ggcgccgacaccagcgcgccggcgctgcgcctggacctgccggagagcaaggaatggccg
ctgggccagttgctggccggcgaacgcgagacgctgggcttctacctcagcggccatccg
ttcgatccgtaccgcgacgaagtgcgcgaactggtcggctgcgacctgagcgcgctggag
aagatctgcgcgcaatccggcggcggccgcggcggcggtggcgacggcgagaagcgcgcg
tggcgcccggaggtcagcgcgatcctcgccggccaggtggtcggcgtgcgccgcaagggc
gacagccaggtgttcgtgcaactggaggacggccgcggccgcatcgagtgcagcgcgttc
tccgacgccatcgccgaattcggccacctgctgacccgcgaccgcatcctcatcgtcaag
ggcggcgtgcgcgaggacgaattcaacggcggctatgccatgcgcatccgccagtgctgg
gactacgagcagatctgcacgcaccacgcgcagcgcctgtcgctgcgcctggacctgcgc
cagcgcagcgcctggccgcgcatcgacggcctgctcgcccgtcaccgcccgggcaagacg
ccgctgcgcctggacctgctgctgcagtcggcgcaaggcggcatcgccggcatgctcgac
ctcaacggcagccattcggtgcgcgtggatccgcagctgctggacgccctgcgcggcgac
ccggcggtgcgcgcggtgaaggtcaagtacagcccgccgtgggcgaactga
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