Xanthomonas sp. CFBP 8445: NUG21_10560
Help
Entry
NUG21_10560 CDS
T11515
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xab Xanthomonas sp. CFBP 8445
Pathway
xab02020
Two-component system
xab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NUG21_10560 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NUG21_10560 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xab03021
]
NUG21_10560 (rpoN)
Transcription machinery [BR:
xab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NUG21_10560 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_31
HTH_IclR
Sigma70_r4
Phage_CII
HTH_23
DUF5429
HTH_26
DUF6990
Motif
Other DBs
NCBI-ProteinID:
UYC10255
LinkDB
All DBs
Position
2475717..2477120
Genome browser
AA seq
467 aa
AA seq
DB search
MKPTVSAQLGQQLHLTPQLLQSIRLLQLDGMQLELEIRRALETNPLLELEEPEGVIEPVV
KHEDAALETAAFDELPESSMWDIPAAGWNDGEDDRMQRIAAGESTDPHLRVLQRLALELP
ALELEAAAFWLEHCDDAGYLDGPLDTLQQLASARLGLPVAQAEAVRQRLLHGDPAGLAAC
DLRECLQAQLSDLPGRVPGRHLAARILEGDLNLLASHDYALLGRQLDAETDDVREAVRLI
LSLQPRPGDSLQPQDAGHVLPDVVAWHADGTWRVALNPATTHRVTVNPMHERALAEAGDA
AQPLREMLQEARWLTRGLSMRYETLLRTTRAIVERQSAFLVKGEEAMAPLTLKEVAEAIG
MHESTISRITTGKYLQTPRGTFELKHFFAVRLEGAAVSGQAVRAMVRRLIESEPAGRPLA
DEAIAGLLSRQGVNVARRTVAKYREQLDIAPARERRRGSKPLLARVG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaccgtttccgcccaactgggccagcaactgcatctgaccccgcaactgctg
cagtcgatccggctgctgcaactcgacggcatgcaactggaactggaaatccgccgcgcg
ctggaaaccaatccgctgctcgaactggaagagcccgagggcgtgatcgagccggtggtc
aagcacgaggatgcggcgctggaaaccgcggcgttcgacgaactgcccgaatcctcgatg
tgggacatcccggccgccggctggaacgacggcgaagacgatcgcatgcagcgcatcgcc
gccggcgaatccaccgacccgcacctgcgcgtgctgcagcggctggccctggaactgccg
gcactggaactggaagcggccgcgttctggctggaacactgcgacgatgccggttacctg
gacggcccgctcgacaccctgcagcaactggccagcgcacgcctgggcctgccggtggcg
caggccgaagcggtgcgccagcgcctgctgcacggcgacccggccggcctggccgcctgc
gacctgcgcgaatgcctacaggcgcagttgagcgacctgcccggccgcgtgccgggccgc
cacctggccgcgcgcatcctcgagggcgatctcaacctgctggccagccacgactacgcg
ctgctcgggcgccagctcgatgccgagaccgacgacgtgcgcgaggcggtgcgactgatc
ctgtcgctgcagccgcggcccggcgacagcctgcagccgcaggacgccggccatgtactg
ccggacgtggtcgcctggcatgccgacggcacctggcgggtggcgctcaacccggccacc
acccaccgcgtcaccgtcaacccgatgcacgagcgcgccctggccgaggccggcgacgcc
gcgcagccgctgcgcgagatgctgcaggaagcgcgctggctgacccgcggcctgtcgatg
cgctacgagaccctgttgcgcaccacccgcgccatcgtcgagcgccagtcggcgttcctg
gtcaagggcgaggaagcgatggcgccgctgaccctgaaagaggtggccgaggcgatcggc
atgcacgagtcgaccatctcgcgcatcaccaccggcaagtacctgcagaccccgcgcggc
acgttcgagctgaagcacttcttcgccgtgcgcctggaaggcgccgcggtgtccgggcag
gcggtgcgcgccatggtccggcgcctgatcgaatccgagccggccgggcggccgctggcc
gacgaggccatcgccggactgctgtcgcgacagggcgtgaacgtggcaaggcgcacagtc
gccaagtatcgtgaacaattggacatcgctcccgcacgcgaacgccgccgcggcagcaaa
ccgctgctggcccgtgtgggctaa
DBGET
integrated database retrieval system
