Xanthomonas sp. CFBP 8445: NUG21_13515 Help Entry NUG21_13515       CDS       T11515                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism xab  Xanthomonas sp. CFBP 8445 Brite KEGG Orthology (KO) [BR:xab00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:xab03400]     NUG21_13515 Enzymes [BR:xab01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      NUG21_13515     5.6.2.6  RNA 3'-5' helicase      NUG21_13515 DNA repair and recombination proteins [BR:xab03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     NUG21_13515 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WHD_Lhr WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 WHD_2nd_Lhr HTH_9 AAA_25 PhoH Motif Other DBs NCBI-ProteinID:  UYC10796 LinkDB All DBs Position complement(3179357..3183700) Genome browser AA seq 1447 aa AA seqDB search MSLAHTRFHPAVARWFEQRFAAPTPAQAAAWPAIQAGRHTLVAAPTGSGKTLTAFLAALD ALVREGLRDGGLQDRTQVLYVSPLKALSNDIQLNLEAPLQGIRAELAALGLPDVQIRTAV RTGDTPQRERAQARRRPPHVLVTTPESLYVLLGSVSGRETLRHVRTVIVDEIHALAANKR GSHLALSLQRLQHLCGVPPLRIGLSATQKPIDAVARFLVGSAAVHDGEADCAIVDIGYAR ARDLALEVPPTPLSVTMSADQWQQVYTRLAELVRSHRTTLVFVNTRRMAERTARHLGELL GAQAVAAHHGSLARETRLLAERRLKAGELQVLVATASLELGLDIGDVDLVCQLGSPRSIA VFLQRAGRSGHAVGGTPKARLFPQSRDDLVECAALLDCVRRGELDALRMLDAPLDVLAQQ LVAEVACQEWDEDALYALVRGAWPYAALPRAQFDAVLRMLSEGFSTRLGPRAGYLHRDAV HRRVRQRRGARMAALTSGGTIPETGDYSVVLEPQAQTIGTVNEDFAVESLGGDVFQLGNA SYRILRVEAGRVRVEDARGAPPNIPFWIGEAPGRSDALSLGVSRLRAEVEQALAQGGAAQ ALQWLCGPLALDAAAAQQIVDYLGRAHAALGVLPTQQCIVLERFFDATGGTQLVIHSVYG SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTRHSFALDEVARYLRAASALDVL VQALLDAPLFGVRWRWNATNALALPRFTGGRKVAPQLQRMKSEDLLATVFPDQVACAENL VGEREIPEHPLVAQTLRDCLDEAMDSAGWLQLLRHLEAGDVRVLARELTAPSPLAAEALD ARPYAFLDDAPLEERRTQAVHSRRYQDPDNADDLGQLDPQAIAAVREEAWPQPRSRDEMH EALLTLGAVSADEVAAQPQWRQWLGELAEDARATCLRGVDGAAAALWVAAEALAAVAPLY PQAGAQPVIAVPDGYAVADWERDSALRELLRWRLAGLGPVTAEALAAPLHLPLREVQAGL LALQQDGYVLGGRFSADATAEEWCERHLLARIHRYTLGSLRREIEPVAPRDYARFLFRWQ HLDAQGQVEGAEALGAVLSQLEGVEAAAPLWEAELLPARVRDYRPAWLDEACSAGRTLWT RLRPGAGGAAPTLRSTPILLLPRRSAGQWSRLSPAPEAGALGSRARKVADHLEAHGASFF DEIAEATRLLSTELEAALAELVAAGRVHCDSYAGLRALLVPASKRPSALSRRRPRMALYG GIQDAGRWAVLRAGAEADDPAARSEAVEHVARTLLRRYGVVCWRLLEREAAWLPPWRELL RVYQRLEARGEIRGGRFIDGLSGEQFALPEAIGLLRQVRRQPGDGSWVCVAAADPANLLG SVLPGARVPRVAGARVLYRDGVPMASWVGERFEPLQDMEAEEHAHAQRLLRGGSASERRT VVALPMV NT seq 4344 nt NT seq  +upstreamnt  +downstreamnt atgtcgttggcgcacacgcgctttcatcccgccgttgcacgctggttcgaacagcgtttc gctgcgcccacgccggcgcaggcagcggcgtggccggcgatccaggccggacggcacacg ttggtcgccgcgccgaccggctccggcaagaccctcaccgcgttcctcgccgcgctggat gcgctggtgcgtgaaggcctgcgcgacggcggcctgcaggaccgcacccaggtgctgtac gtgtcgccactgaaagcgctttcaaacgatatccagctcaatctcgaggcgccgctgcag ggcatccgcgccgagttggcggcactgggcctgccggatgtgcagatccgcaccgcggtg cgcaccggcgatacgccgcagcgcgagcgcgcgcaggcgcggcggcgtccgccgcacgtg ctggtgaccacgccggagtcgctgtacgtgctgctcggctcggtgtccgggcgcgagacg ctgcgccatgtgcgcacggtgatcgtcgacgagatccatgcgctggcggccaacaagcgc ggcagccatctggcgctgtcgctgcagcgcctgcagcatctgtgcggagtgccgccgctg cgcatcggcctgtcggcgacgcagaagccgatcgatgcggtcgcgcgctttctggtgggc agcgcggcggtgcacgacggcgaggcggactgcgccatcgtcgacatcggctatgcgcgc gcccgcgacctggcgctggaggtgccgccgacgccgctcagcgtgacgatgtccgccgat cagtggcagcaggtgtatacgcgcctggccgaactggtgcgctcgcaccgcaccaccctg gtgttcgtcaacacccggcgcatggccgagcgcaccgcccggcatctcggcgaactgctc ggcgcgcaggcggtggcggcgcatcacggcagtctggcgcgcgagacccggttgctcgcc gagcgccggctcaaggccggcgaactgcaggtgctggtggcgaccgcgtcgctggaactg ggcctggatattggcgacgtcgacctggtctgccagctcggctcgccgcggtcgatcgcc gtattcctgcagcgcgccggccgctccgggcatgcggtgggcggcacgccgaaggcgcgg ctgttcccgcagtcgcgcgacgacctggtcgagtgcgcggccttgctggattgcgtgcgc cgcggcgaactggatgcgctgcgcatgctcgatgcgccgctggacgtgctcgcccagcag ctcgtcgccgaggtggcctgccaggagtgggacgaagacgcgctgtatgcgctggtgcgt ggcgcctggccgtatgcggcgttgccgcgcgcacagttcgacgcggtgctgcgcatgctc agcgaaggcttcagcacgcggctggggccgcgcgccggctacctgcatcgcgatgcggtg catcgccgcgtacgccagcgccgcggcgcgcggatggcggcgctcacctccggcggcacc atccccgagaccggcgactacagcgtggtgctggagccgcaggcgcagaccatcggcacg gtcaacgaggatttcgcggtggaaagcctgggcggcgacgtgttccagctcggcaacgcc agctaccgcatcctgcgcgtggaagccgggcgggtgcgggtggaggacgcgcgcggtgcg ccgcccaacatcccgttctggatcggcgaagcgccggggcgcagcgacgcgctgtcgctg ggcgtgtcacggctgcgggcggaggtcgagcaggcgctggcgcagggcggggcggcgcag gcgctgcagtggttgtgcgggccgctggcgctggatgcggccgccgcgcagcagatcgtc gactatctgggccgcgcgcatgcggcgctgggcgtcttgccgacccagcagtgcatcgtg ctggaacgcttcttcgacgccaccggcggcacccagttggtgatccacagcgtctacggc agccgcatcaaccgtgcctggggcctggccctgcgcaagcgcttctgccgcaccttcaat ttcgagctgcaggcggcggcgaccgaggatgcgatcgtgctgtcgctgtcgacccggcac agcttcgccctggacgaggtggcgcgctacctgcgcgccgcctcggcgctggacgtgctg gtacaggcgttgctggacgcgccgctgttcggcgtgcgctggcgctggaacgccaccaac gcgctggcgttgccgcgcttcaccggcgggcgcaaggtcgcgccgcaattgcagcggatg aagtccgaggatctgctggccacggtgtttcccgaccaggtggcgtgcgcggagaatctt gtcggcgagcgcgagattcccgagcacccgctggtggcgcagaccctgcgcgactgcctg gacgaggcgatggacagcgccggctggctgcaactgctgcgccatctcgaggccggcgac gtgcgcgtactggcgcgcgaactgaccgcgccgtcgccgctggcggccgaggcgctggat gcgcggccgtatgcctttctcgacgacgccccgctggaggaacggcggacccaggcggtg cacagccgtcgctaccaggatccggacaacgccgacgatctcggccagttggatccgcag gcgatcgccgcggtgcgcgaggaggcctggccgcagccgcgcagccgcgacgagatgcac gaggcgctgctcacgctcggcgcggtgagcgcggacgaggtcgccgcacagccgcagtgg cggcagtggttgggtgaactggcggaagacgcgcgggccacctgcctgcgtggcgtcgac ggcgccgcggcggcgttgtgggtggcggccgaggcgctggcggcggtggcgccgctgtat ccgcaggccggcgcgcaaccggtcatcgccgtacccgatggctacgcggtcgccgactgg gagcgcgacagcgcgttgcgcgaactgctgcgctggcgcctggccgggctggggccggtc accgccgaggcgctggcggcgccgctgcacctgccgctgcgcgaagtgcaggccgggttg ctggcgctgcagcaggacggctatgtgctgggcgggcggttcagcgccgacgccactgcc gaggaatggtgcgagcggcatctgctggcgcgcatccaccgctacaccctcggcagcctg cgccgcgagatcgagccggtggcgccgcgcgactacgcgcgcttcctgttccgttggcag catctggatgcgcagggtcaggtggagggcgccgaggcgctgggcgcggtgctgtcgcaa ctggagggcgtggaggcggcggcgccgctgtgggaggcggaactgctgccggcacgggtg cgcgactaccgcccggcatggctggacgaggcctgcagcgccgggcgtacgctgtggacg cgattgcgccccggcgccggcggcgccgcgccgacgctgcgcagcacgccgatcctgctg ctgccgcggcgcagcgccggacagtggtcgcggctgtcgccagcgccggaagccggcgcg ctggggtcgcgcgcgcgcaaggtggccgaccatctcgaggcgcacggcgcctcgttcttc gacgagatcgccgaggccacgcgcctgctgtccaccgagctggaggcggcactggccgaa ctggtcgctgccggccgggtccattgcgacagctatgccggcttgcgcgccttgctggtg ccggcatcgaagcggccctcggcgctgtcgcggcggcggccgcgcatggcgctgtacggc ggcatccaggatgccgggcgctgggcggtgctgcgcgccggtgccgaggccgacgacccg gccgcgcgcagcgaggcggtcgagcacgtcgcgcgcaccctgctgcgccgctacggcgtg gtctgctggcgcctgctcgagcgcgaggcggcgtggctgccgccgtggcgcgagctgctg cgggtctaccagcgcctggaggcgcgtggcgagatccgcggtgggcgcttcatcgacggc ctgtccggcgaacagttcgccctgccggaggcgatcggcctgctgcggcaggtgcgccgc cagcccggcgacggcagctgggtgtgcgtggccgccgccgatccggccaatctgctcggc agcgtgttgcccggcgcgcgcgtgccgcgggtggcgggcgcgcgcgtgctgtaccgggat ggcgtgccgatggcgagttgggtcggcgagcgcttcgaaccgctgcaggacatggaggcc gaggagcatgcgcacgcgcagcggctgttgcgcggtggcagtgcgtcggaacggcgaacg gtcgtggcgctgccgatggtgtga

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