Xanthomonas sp. CFBP 8445: NUG21_15870
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Entry
NUG21_15870 CDS
T11515
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
xab Xanthomonas sp. CFBP 8445
Brite
KEGG Orthology (KO) [BR:
xab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xab02000
]
NUG21_15870
Transporters [BR:
xab02000
]
Other transporters
Pores ion channels [TC:
1
]
NUG21_15870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF481
DUF748
Autotransporter
SlipAM
DUF3575
TSP_3
Motif
Other DBs
NCBI-ProteinID:
UYC11228
LinkDB
All DBs
Position
complement(3707567..3708664)
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AA seq
365 aa
AA seq
DB search
MNKKILTAALLGGLAVAQAASAQEFDDRWYLTGSAGFNFQDKDRTTNDAPFVTLGLGKFI
NPNWSLDGELNYQNPNFDKNQDLNWSQYGISFDLRRHFIQEGRGWNPYLLFGLGYQRSEE
EFDTGGPVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAEVAYRADFDDQSVAAPSENWFG
DVLASVGVVIPLGPPPAAPVAPPPPPAAAPSCADLDDDGDGVNNCDDKCPNSQPGQTIGP
DGCPVPVSIDLKGVNFDFNKANLRPDAVAILGEATEILKRYPDLRVEVAGHTDSKGTEAY
NQKLSERRARVVYDYLVKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTE
LNVQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaattctcaccgccgcgttgctgggcggtctggccgtcgcccaggcagcg
tccgcgcaggaattcgacgaccgctggtacctgaccggttcggctggcttcaacttccag
gacaaggaccgcaccaccaacgatgcgcccttcgtcaccctgggcctgggcaagttcatc
aacccgaactggtcgctggacggtgaactgaactatcagaacccgaacttcgacaagaac
caggacctgaactggagccagtacggcatctcgttcgacctgcgtcgccacttcatccag
gaaggccgcggctggaacccgtacctgctgttcggcctgggctaccagcgctcggaagaa
gagttcgacaccggcggtccggtctccccgggccagcgcaaggacggcaacttcgccgcc
aaggccggcgtcggtctgcagaccaccttcgacaagcgcgttgccgtgcgtgccgaagtg
gcctaccgcgctgacttcgacgaccagagcgttgccgctccgtcggagaactggttcggc
gacgtgctggcttcggtcggcgtcgtgatcccgctgggcccgccgccggctgccccggtc
gccccgccgccgccgccggccgctgcgccgagctgcgccgatctggacgacgatggtgac
ggcgtcaacaactgcgacgacaagtgcccgaactcccagcctggccagaccatcggtccg
gacggctgcccggtgccggtgtcgatcgacctgaagggcgtcaacttcgacttcaacaag
gcgaacctgcgtccggacgccgtggcgatcctgggcgaggccaccgagatcctgaagcgc
taccccgacctgcgcgtcgaggttgccggtcacaccgactcgaagggtaccgaagcctac
aaccagaagctgtccgagcgccgcgcccgcgtcgtgtacgactacctggtgaagaacggc
gtcgacgcgtcgcgtctggtcggcccgatcggctacggcgagagccgcccgattgctccg
aacaccaacccggatggttcggacaacccggaaggccgcgccaagaaccgtcgtaccgag
ctgaacgtccagaactaa
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