Xanthomonas citri subsp. citri 306: XAC1132
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Entry
XAC1132 CDS
T00084
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xac
Xanthomonas citri subsp. citri 306
Pathway
xac03030
DNA replication
xac03430
Mismatch repair
xac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XAC1132 (holB)
03430 Mismatch repair
XAC1132 (holB)
03440 Homologous recombination
XAC1132 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xac03032
]
XAC1132 (holB)
03400 DNA repair and recombination proteins [BR:
xac03400
]
XAC1132 (holB)
Enzymes [BR:
xac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XAC1132 (holB)
DNA replication proteins [BR:
xac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XAC1132 (holB)
DNA repair and recombination proteins [BR:
xac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XAC1132 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_22
TIP49
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAM36005
UniProt:
A0AAI7ZDX8
LinkDB
All DBs
Position
1282627..1283586
Genome browser
AA seq
319 aa
AA seq
DB search
MTAAFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASSPDPALA
QRTRQLIAAGTHPDLQLVSFIPNRTGDKLRNEIVIEQVREISQKLALTPQYGIAQVVIVD
PADAINRSACNALLKTLEEPSPGRYLWLISAQPARLPATIRSRCQRLEFKLPPAHEALAW
LLSEGVSERAAQEALDAARGHPGLAAQWLREDGLAVRRAVAQDLEQIANGRAGAVDVAQR
WTNDGQADQRLRHAADLALAQASAGLTDPSRLHKLATWFDAANRTRDLLRTTVRADLAVT
ELLLSWREGERQPRSRGTR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcattttcgccctggcagcagcgcgccttcgaccagaccgtggctgcactg
gatgcggggcgccttggacatgggttgctgatctgcggcccggaaggtctgggcaagcgt
gccgtcgccctggccctggccgagcacgtcctggccagctcgccagacccggcactggcg
cagcgcacgcgccagctgattgccgccggtacccatccggacctgcaactggtctcgttc
attcccaatcgcaccggcgacaagctgcgtaacgagatcgtcatcgagcaggtgcgcgag
atttcgcagaagctcgcgctgaccccgcagtacggcattgcccaggtcgtgatcgtcgac
ccggccgatgcgatcaatcgctcggcctgcaatgccttgctcaagaccctggaagagccg
tcgccggggcgctacctgtggttgatcagcgcgcagccagcgcgtctaccggcgaccatc
cgcagccgctgccagcgcctggaattcaagttgccgcctgcgcacgaggcgctggcctgg
ttgctctcggaaggtgtgagcgagcgcgccgcacaggaagcgctggacgccgcgcgcggc
caccccggtctggccgcgcagtggttgcgcgaagatggcctggccgtccggcgtgcggtt
gcgcaggatctggagcagatcgccaatggacgcgccggcgcagtcgatgtcgcgcagcgt
tggaccaacgatggccaggccgaccagcgcctgcgccatgccgccgatctggcattggca
caggcatcggccggcttgaccgatccatcgcggttgcacaagcttgcgacctggttcgac
gctgccaaccgcacccgcgatctgctgcgcaccaccgtccgcgccgacctggcggtgacg
gaattgttgctgtcctggcgcgagggagagcgccagccacgttctaggggaactcgatga
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