Xanthomonas citri pv. citri 306: XAC1599
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Entry
XAC1599 CDS
T00084
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xac
Xanthomonas citri pv. citri 306
Pathway
xac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XAC1599 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xac03400
]
XAC1599 (sbcB)
Enzymes [BR:
xac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
XAC1599 (sbcB)
DNA repair and recombination proteins [BR:
xac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XAC1599 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XAC1599 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XAC1599 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
BON_like
Motif
Other DBs
NCBI-ProteinID:
AAM36467
UniProt:
A0AAI7ZEQ7
LinkDB
All DBs
Position
complement(1845619..1847064)
Genome browser
AA seq
481 aa
AA seq
DB search
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV
TGITPQHALREGVTEAEAFARIAEQMGRPQTCTLGYNSIRFDDEFIRCGLFRNFYDPYER
EWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDVREGDAHEALSD
VYATIGMARKFQQHQPKLWDYALRLRDKRFAAALLDVIAMQPVLHVSQRYPASRLCAAAV
LPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQRIPLKEVHLNK
SPALVAWQHLRAADFERLGVDHDAVVAKAARLRALGPELAEKVRQVYGSERAAAAAVNDA
DASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFRYRARNWPQTLSFEE
QERWNVYRRQRLLQDRGLGEVTLEQYHAQIADLRGAHPDDATKQALLDQLAAWGSDLQRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacagctttctcttctacgacctggaaaccttcggccaggatccacgccgcacc
cgcattgcacagttcgctgcagtgcgcaccgacgcgcaactgcgcgtgatcgaagagccc
atcagctttttcgtgcagccggccgacgatctgctgccctcgccctacgccaccatggtg
accggcatcaccccgcagcacgcgctgcgcgaaggcgtcaccgaggccgaggcgttcgca
cgcatcgccgaacagatgggccgaccgcagacctgcacgctgggctacaactcgatccgc
ttcgacgacgaattcatccgctgcggcctgttccgcaatttctacgacccgtacgagcgc
gagtggcgtggcggcaattcccgctgggatttgctggatgtgctgcgactggtacacgcg
ctgcgcccggacggcatcgtctggccacagcgcgaagatggcgccacctcgttcaagctg
gagcacctggccgatgccaacgatgtgcgcgaaggcgatgcgcacgaagccttgtcggac
gtgtacgccaccatcggcatggcgcgcaaattccagcagcaccagccgaagttgtgggac
tacgcgctgcgcctgcgcgacaagcgctttgcagccgccttgctggatgtcattgcgatg
caaccggtgctgcatgtttcgcagcgttaccccgcctcgcgcctttgcgctgcggcggta
ctgccgctgacgcgccacccgcgcatcgacagccgcgtgatcgtattcgatctggagggc
gacccggaggtgctgttgcggctcagccccgacgatattgcagaccgcctgtatatccgc
gccgcggatttgccggaaggcgaacagcgtatcccgctaaaggaagtgcatctgaacaag
tcgcccgcgctggtagcctggcagcatctgcgcgctgcggatttcgagcgcctgggtgtg
gatcacgacgcggtagtggccaaggcggcacggttgcgcgcattgggccctgaacttgcc
gagaaggtgcgccaggtctacggcagcgaacgcgccgcggccgcggcggtcaacgatgcc
gacgcctcgctctacgatggctttctggccgaaggcgacaaacgcctgcttgcgcaggtc
cgcgccagcgcgccggacgaactgggcgcgctggaagcgcgctttcgcgatccgcgcctg
atcgagctgctgtttcgctaccgcgcgcgcaactggccgcagacactctcgttcgaggaa
caggagcgctggaacgtgtatcgccgccagcgcctgctccaagaccgcggcctgggcgaa
gtcaccctggagcaataccacgcgcagatcgcggatttacggggtgctcaccccgacgat
gctaccaagcaagccctactcgaccagctcgccgcctggggttcggacctccaacgcacg
ctatga
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